Vitamin B12 Transport Protein Btuf

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-148   GLN-149  12.4 12.6 2.3 2.8 35.1 34.9 31.7
 GLN-149   TYR-150  12.7 12.8 5.4 -10.0 85.3 85.4 -40.3
 TYR-150   ALA-151  10.9 11.1 -11.8 -18.2 29.7 31.2 283.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-242   TRP-243  10.9 11.0 0.3 0.8 51.2 46.9 2.5
 TRP-243   PHE-244  7.9 8.2 4.3 7.3 37.9 34.9 84.2
 PHE-244   GLU-245  6.8 7.0 14.4 -4.3 53.8 46.0 68.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-251   ILE-252  6.7 7.0 6.9 -3.7 82.0 85.3 21.0
 ILE-252   LEU-253  6.3 6.3 6.1 3.3 23.6 20.2 50.8
 LEU-253   ALA-254  5.7 5.8 -4.6 1.4 93.9 94.1 -0.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees