Hypothetical Protein Yjhp

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-22   GLU-23  7.6 8.1 6.0 -15.2 97.2 99.8 -1.2
 GLU-23   LYS-24  4.1 4.6 -4.5 3.8 20.0 18.7 8.4
 LYS-24   TYR-25  4.1 4.6 18.0 -11.3 108.4 106.8 -26.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-107   ALA-108  12.9 13.7 19.6 -26.3 99.2 97.3 20.5
 ALA-108   CYS-109  11.3 12.1 -9.3 24.3 105.1 96.4 -6.5
 CYS-109   VAL-110  12.1 13.0 -2.1 -18.9 84.2 70.4 29.9
 VAL-110   GLY-111  10.9 11.5 130.0 6.7 67.0 94.5 205.4
 GLY-111   ALA-112  14.1 13.6 159.0 -21.6 136.0 46.8 78.6
 ALA-112   THR-113  17.3 16.5 126.3 -2.0 104.5 23.2 -1158.9
 THR-113   TRP-114  17.5 14.5 -155.9 -11.7 107.2 133.9 1711.9
 TRP-114   ILE-115  14.7 17.7 10.3 6.0 23.9 73.5 123.5
 ILE-115   ALA-116  16.5 19.3 21.1 -28.9 42.5 27.3 -29.8
 ALA-116   GLY-117  16.1 17.5 165.6 -104.7 90.0 45.3 206.5
 GLY-117   GLY-118  13.2 17.2 5.0 -3.5 98.7 106.9 -22.9
 GLU-123   GLU-124  12.8 10.7 -162.9 1.9 106.0 113.6 -611.1
 GLU-124   LEU-125  15.4 13.7 14.5 -8.4 140.4 130.8 -38.1
 LEU-125   LEU-126  17.5 16.1 -26.0 13.6 53.9 52.9 53.0
 LEU-126   ALA-127  14.5 14.6 -27.9 45.7 113.2 117.1 82.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-138   GLY-139  7.3 7.6 -13.9 -3.7 68.6 62.5 70.7
 GLY-139   GLU-140  8.2 8.8 -15.1 -0.5 136.1 130.1 -96.4
 GLU-140   PRO-141  9.1 9.9 -17.0 12.1 72.3 75.7 12.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-167   PRO-168  9.8 9.5 3.0 -7.9 128.7 134.2 15.9
 PRO-168   GLY-169  9.8 9.1 2.1 4.7 146.5 142.2 -49.7
 GLY-169   LEU-170  9.0 8.8 -14.1 4.1 100.5 102.3 5.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-172   ALA-173  5.3 4.7 8.3 -6.4 62.0 59.7 9.0
 ALA-173   PHE-174  3.7 3.9 -3.2 3.8 77.7 77.2 17.9
 PHE-174   ASP-175  0.8 1.9 10.9 -9.5 58.2 58.2 32.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-240   GLY-241  10.4 10.5 -17.8 11.8 105.9 108.5 1.8
 GLY-241   VAL-242  6.7 6.9 7.3 4.2 111.4 113.5 -77.9
 VAL-242   PHE-243  4.5 5.0 18.8 -14.7 113.5 116.9 -9.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees