Nadp-Dependent Alcohol Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PRO-1077   GLY-1078  12.0 12.1 -5.9 11.1 52.9 56.9 -110.3
 GLY-1078   ASP-1079  12.2 12.2 -2.6 0.4 49.0 47.7 -24.7
 ASP-1079   ARG-1080  8.8 8.9 4.5 -9.7 147.1 144.7 185.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ILE-1082   VAL-1083  8.5 8.3 2.3 -2.9 121.9 120.3 -21.6
 VAL-1083   PRO-1084  11.8 11.6 2.4 -1.3 55.2 55.8 36.0
 PRO-1084   CYS-1085  13.2 13.0 1.8 -4.5 94.8 95.2 65.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PRO-1088   ASP-1089  19.0 19.3 6.0 9.6 8.7 15.0 486.2
 ASP-1089   TRP-1090  19.9 19.7 13.2 -9.9 83.6 86.4 -70.2
 TRP-1090   ARG-1091  18.6 18.4 17.8 -13.3 42.0 42.1 152.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLN-1101   HIS-1102  22.5 22.6 -3.6 1.0 66.4 67.4 -10.4
 HIS-1102   SER-1103  25.7 25.9 2.9 -9.0 178.6 179.7 189.9
 SER-1103   ASN-1104  24.4 24.6 -0.9 4.2 69.4 67.9 -71.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-1105   MET-1106  29.3 29.4 7.9 -12.2 163.3 162.5 133.4
 MET-1106   LEU-1107  29.7 29.8 -5.9 3.1 71.5 68.8 -31.9
 LEU-1107   ALA-1108  26.7 26.8 7.4 3.7 45.3 47.3 239.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 GLY-1109   TRP-1110  22.3 22.2 11.0 1.1 60.1 59.8 202.6
 TRP-1110   LYS-1111  22.1 22.5 -2.3 -2.1 65.5 58.7 101.3
 LYS-1111   PHE-1112  23.0 22.9 -0.5 1.7 118.0 113.7 -56.0
 PHE-1112   SER-1113  22.2 22.3 15.6 -24.9 38.4 50.0 -165.3
 SER-1113   ASN-1114  25.2 25.5 40.4 -41.1 87.0 87.0 115.4
 ASN-1114   PHE-1115  26.8 27.4 -10.5 15.9 46.3 30.6 -42.4
 PHE-1115   LYS-1116  28.3 28.1 22.8 -33.6 128.5 124.6 -0.1
 LYS-1116   ASP-1117  25.7 25.7 5.1 -9.9 56.5 46.0 -88.9
 ASP-1117   GLY-1118  25.5 25.7 9.2 3.6 62.1 58.6 169.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ALA-1134   ILE-1135  5.6 5.4 2.0 -2.2 102.3 103.7 -14.1
 ILE-1135   LEU-1136  3.6 3.3 -1.3 -4.2 9.6 11.8 158.6
 LEU-1136   PRO-1137  4.9 4.7 -4.3 1.0 79.8 78.4 -44.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 PRO-1141   LEU-1142  8.3 8.3 -1.3 4.5 63.6 65.7 8.8
 LEU-1142   GLU-1143  10.3 10.3 2.1 5.5 56.2 54.5 138.2
 GLU-1143   ASN-1144  11.2 10.9 -16.7 6.5 97.3 92.4 -130.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 VAL-1146   MET-1147  11.3 11.1 1.9 1.1 118.2 118.9 -36.2
 MET-1147   ILE-1148  10.9 10.8 0.6 -0.9 61.4 62.4 -26.7
 ILE-1148   THR-1149  9.7 9.5 -1.8 7.2 126.0 126.1 85.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 VAL-1197   GLY-1198  21.5 21.5 10.0 -1.3 100.1 104.3 -104.4
 GLY-1198   SER-1199  20.7 21.1 17.5 -5.9 28.7 30.6 266.7
 SER-1199   ARG-1200  20.3 20.9 -9.2 -7.6 83.3 90.4 13.9
 ARG-1200   PRO-1201  19.1 19.4 5.4 -7.1 76.9 78.6 -59.0
 PRO-1201   ILE-1202  16.0 16.1 8.7 5.2 131.7 134.6 -258.6
 ILE-1202   CYS-1203  14.1 14.5 -2.5 -2.7 56.2 55.7 116.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 LYS-1288   THR-1289  35.5 35.8 7.3 -7.0 146.3 144.0 49.1
 THR-1289   ILE-1290  33.8 34.0 -1.2 3.2 96.0 94.8 -63.2
 ILE-1290   LYS-1291  32.4 32.5 4.5 -12.2 150.9 149.8 163.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 ARG-1306   ASP-1307  4.5 4.4 -0.2 4.9 72.0 70.8 -61.6
 ASP-1307   MET-1308  5.0 5.4 -5.4 4.1 20.4 16.1 52.5
 MET-1308   VAL-1309  6.7 6.8 -3.9 3.6 52.4 55.2 -7.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees

Residue
i		 Residue
i+1		 Distance of hinge axis to residue i in conformer 1
(A) 		Distance of hinge axis to residue i in conformer 2
(A) 		Change in psi (i)
(deg) 		Change in phi (i+1)
(deg) 		Angle of psi(i) axis to hinge axis conformer 1
(deg) 		Angle of psi(i) axis to hinge axis conformer 2
(deg) 		Percentage Progress
 SER-1317   LYS-1318  6.7 6.5 -1.5 5.4 142.8 139.9 73.8
 LYS-1318   LEU-1319  7.9 7.8 -4.4 0.0 78.4 78.3 8.1
 LEU-1319   VAL-1320  11.0 11.0 3.9 -2.3 95.7 97.2 -10.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees