Conserved Hypothetical Protein Af2008

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-19   SER-20  8.7 8.4 2.4 1.8 100.5 99.5 -15.7
 SER-20   ASP-21  5.5 5.2 1.0 1.0 35.2 33.7 28.7
 ASP-21   VAL-22  4.5 4.3 -1.2 1.5 96.7 96.7 -19.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-46   ALA-47  8.5 8.7 -17.0 -4.6 31.9 38.4 137.9
 ALA-47   ARG-48  10.0 9.7 0.0 2.2 47.3 41.9 -33.2
 ARG-48   PHE-49  12.2 12.2 0.5 1.6 120.0 122.9 10.6
 PHE-49   VAL-50  9.7 10.0 -5.0 0.4 49.2 52.3 15.8
 VAL-50   ARG-51  7.2 7.1 0.4 5.8 145.8 142.7 -30.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-57   LEU-58  4.7 4.9 0.5 -0.7 44.2 45.0 2.6
 LEU-58   LYS-59  6.4 6.4 2.8 1.9 32.4 30.9 27.1
 LYS-59   ARG-60  8.0 8.2 0.7 -2.3 63.0 61.4 -1.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-85   LEU-86  4.0 3.7 -3.7 5.4 59.6 61.0 5.0
 LEU-86   LYS-87  7.1 6.8 -4.3 -1.0 22.8 24.8 22.9
 LYS-87   GLU-88  5.4 5.2 1.2 -0.5 86.0 87.8 -0.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees