Peroxisomal Targeting Signal 1 Receptor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-457   GLY-458  9.7 9.6 6.6 -2.4 86.3 89.6 -7.2  GLY-458   VAL-459  6.1 6.2 1.5 -8.5 85.2 80.9 12.1  VAL-459   LEU-460  7.4 8.1 2.6 -0.3 15.1 10.9 8.2  LEU-460   PHE-461  8.4 9.0 17.0 -19.6 60.8 59.6 -21.0  PHE-461   ASN-462  5.0 5.3 13.9 -10.3 99.4 97.6 39.7  ASN-462   LEU-463  4.4 5.8 12.4 -14.9 54.2 49.5 -16.8  LEU-463   SER-464  7.7 8.9 10.4 -18.9 19.8 22.5 -29.9 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  TYR-485   LEU-486  2.8 3.1 11.0 -17.2 39.5 37.1 -22.1  LEU-486   LEU-487  5.5 5.7 4.8 8.2 41.3 34.6 61.3  LEU-487   TRP-488  3.4 4.1 0.9 -10.4 85.1 81.5 -11.8 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  LEU-495   ALA-496  5.6 5.4 -5.0 12.4 72.2 78.6 -10.0  ALA-496   ASN-497  8.4 8.6 -12.7 -8.7 20.3 27.0 92.0  ASN-497   GLY-498  7.1 8.2 2.2 14.5 131.6 141.2 -67.4  GLY-498   ASN-499  7.0 6.6 -10.6 7.1 97.4 87.0 4.9  ASN-499   GLN-500  10.7 10.2 -1.4 -7.1 126.8 116.3 -21.2  GLN-500   SER-501  10.6 9.9 -12.7 18.9 150.7 155.6 37.7 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees