Glutamate Receptor 4,Glutamate Receptor

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-102   PRO-103  7.9 7.9 -2.5 2.9 145.9 142.8 28.1
 PRO-103   PHE-104  5.2 5.1 -6.4 5.5 150.6 148.7 -24.9
 PHE-104   MET-105  5.8 5.9 0.8 2.1 63.9 65.0 -32.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-215   LYS-216  7.6 7.6 2.9 -4.4 75.3 78.3 35.8
 LYS-216   GLY-217  3.9 3.9 -8.1 4.2 36.8 33.0 49.6
 GLY-217   TYR-218  1.2 1.4 15.1 -3.6 104.4 102.2 -62.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-251   TRP-252  5.2 5.5 -1.2 10.0 92.3 95.8 69.2
 TRP-252   TRP-253  1.8 2.0 -5.2 10.7 80.3 82.4 0.5
 TRP-253   TYR-254  4.8 4.9 -1.7 4.9 131.3 135.1 37.0
 TYR-254   ASP-255  7.8 7.7 -7.1 -4.9 156.3 158.0 -191.3
 ASP-255   LYS-256  7.6 6.9 -4.5 31.2 144.9 124.6 262.7
 LYS-256   GLY-257  6.1 4.1 -41.7 10.4 72.5 86.0 90.1
 GLY-257   GLU-258  8.5 7.4 5.5 -5.5 39.3 29.2 -12.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees