DNA Repair Protein Rad51

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-154   SER-155  13.7 13.0 -13.9 8.2 153.9 154.4 -94.3
 SER-155   GLU-156  15.1 14.4 24.1 -25.3 88.9 81.4 32.6
 GLU-156   LEU-157  14.2 13.6 45.0 -28.7 78.8 83.0 81.7
 LEU-157   ILE-158  10.5 10.1 4.7 -7.7 17.5 19.4 -3.8
 ILE-158   CYS-159  8.4 8.6 -18.0 36.7 119.5 127.1 59.2
 CYS-159   LEU-160  7.3 7.7 11.8 -7.6 41.1 42.0 35.9

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees