Inorganic Polyphosphate/atp-Nad Kinase
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-103
TRP-104
7.1
7.6
7.4
15.6
16.4
16.4
290.1
TRP-104
PHE-105
8.9
9.2
5.0
-3.7
76.5
82.7
-112.4
PHE-105
ILE-106
8.9
9.0
4.5
-1.7
78.7
76.8
37.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-231
TYR-232
7.6
8.0
8.5
6.0
8.2
6.0
111.5
TYR-232
VAL-233
6.6
6.7
4.6
-1.3
76.9
80.9
49.5
VAL-233
ARG-234
4.0
4.0
1.8
-7.8
41.5
41.7
-113.9
ARG-234
ILE-235
6.0
5.9
12.7
-14.2
48.4
53.0
26.7
ILE-235
LEU-236
4.6
4.8
12.7
-10.4
50.0
48.0
57.7
LEU-236
ARG-237
7.3
7.4
-1.0
-4.8
156.9
154.6
-58.1
ARG-237
PRO-238
7.0
6.9
1.3
-4.7
55.7
54.6
-7.3
PRO-238
PRO-239
9.2
9.0
-5.9
4.1
118.0
120.8
-20.6
PRO-239
GLU-240
11.2
10.5
9.3
-11.0
39.1
39.6
-17.7
GLU-240
TYR-241
8.9
8.2
4.0
-13.6
105.7
103.0
154.4
TYR-241
ASP-242
5.8
5.0
-6.1
4.8
109.5
106.1
-38.1
ASP-242
TYR-243
5.0
4.6
14.6
-7.1
105.4
105.0
-33.9
TYR-243
VAL-244
5.0
4.8
7.8
-10.1
44.1
46.2
22.2
VAL-244
THR-245
6.6
6.5
-10.6
15.5
124.4
124.4
-72.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees