Hypothetical Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-20   GLN-21  18.0 17.7 -3.2 -5.6 110.2 105.4 -66.2
 ILE-23   PRO-24  9.3 8.9 -33.6 10.2 60.8 57.2 316.6
 PRO-24   PHE-25  9.1 9.3 -23.8 -54.1 63.9 64.5 689.1
 GLN-29   HIS-30  7.7 7.7 -0.2 9.9 64.8 72.8 -49.0
 HIS-30   ASN-31  6.0 6.0 -7.1 2.8 103.2 99.6 26.7
 ASN-31   THR-32  2.8 2.6 -2.6 2.4 113.4 114.4 36.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-107   TYR-108  3.1 3.4 -9.0 8.3 146.8 145.0 2.7
 TYR-108   ALA-109  4.7 4.6 -11.7 1.0 92.5 93.2 -17.7
 ALA-109   ALA-110  8.0 7.9 15.0 -13.3 33.2 27.1 9.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-140   SER-141  12.3 12.4 3.4 7.0 157.1 152.3 -128.8
 SER-141   SER-142  9.7 9.6 -12.1 14.1 94.2 93.4 -42.9
 SER-142   PHE-143  6.5 6.6 -7.6 -0.7 36.6 42.4 119.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-177   PRO-178  12.1 11.7 1.7 -2.4 114.2 123.3 -33.9
 PRO-178   GLU-179  8.6 8.3 -1.3 10.3 8.7 6.0 -115.0
 GLU-179   LEU-180  6.7 6.6 -1.8 3.2 91.4 91.5 19.1
 LEU-180   LEU-181  5.2 5.3 -11.0 11.2 42.0 43.3 9.9
 LEU-181   ILE-182  2.5 2.6 0.7 1.8 99.4 96.0 55.5
 ILE-182   ASN-183  5.4 5.7 2.4 -1.4 136.9 135.1 -12.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees