DNA Mismatch Repair Protein Muts

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-771   GLY-772  15.4 15.6 -18.7 -8.5 15.2 12.4 242.6
 GLY-772   LEU-773  15.6 15.5 2.4 -9.4 111.4 108.2 0.2
 LEU-773   ALA-774  12.5 12.5 6.8 6.3 73.2 67.0 3.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-776   ALA-777  15.7 15.4 1.1 1.5 92.1 93.1 14.8
 ALA-777   LEU-778  14.9 14.9 -3.6 -6.6 86.6 90.7 -40.7
 LEU-778   ALA-779  18.6 18.7 14.8 -17.5 27.0 28.2 -24.7
 ALA-779   GLY-780  19.4 19.4 8.4 -11.9 49.0 47.4 -13.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees