Ras-Related Protein Rab-27b
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-7
TYR-8
17.5
17.7
-18.0
9.2
82.7
83.5
114.6
TYR-8
LEU-9
14.0
14.2
6.4
2.4
162.4
164.4
-161.0
LEU-9
ILE-10
12.7
13.0
-6.5
10.0
99.8
96.4
39.5
ILE-10
LYS-11
9.0
9.2
1.6
2.4
33.6
33.5
88.1
ILE-10
LYS-11
9.0
9.2
1.6
2.4
33.6
33.5
88.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-10
LYS-11
9.0
9.2
1.6
2.4
33.6
33.5
88.1
ILE-10
LYS-11
9.0
9.2
1.6
2.4
33.6
33.5
88.1
LYS-11
LEU-12
7.1
7.3
8.3
-10.7
84.8
85.5
-12.1
LEU-12
LEU-13
3.7
4.0
-10.0
12.7
139.9
140.6
20.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ARG-28
TYR-29
10.8
10.9
-11.1
14.3
147.7
142.7
139.8
TYR-29
THR-30
11.0
11.3
12.6
-28.1
84.2
90.9
-198.9
THR-30
ASP-31
11.9
11.9
-36.6
15.2
53.9
41.8
319.8
ASP-31
ASN-32
14.0
13.2
50.7
-13.0
95.7
79.2
-122.4
ASN-32
LYS-33
14.5
14.7
-48.3
70.8
65.5
40.5
-363.6
LYS-33
PHE-34
13.4
15.2
-64.9
-47.6
108.8
86.1
-314.6
PHE-34
ASN-35
14.2
14.4
25.5
23.1
77.0
25.5
623.0
ASN-35
PRO-36
11.5
12.6
83.6
-23.5
101.2
95.5
-16.3
PRO-36
LYS-37
13.4
13.4
-1.7
4.6
84.9
87.5
131.8
LYS-37
PHE-38
12.2
12.0
5.9
-6.4
82.3
80.9
3.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-92
MET-93
5.9
5.9
-8.9
8.8
35.5
35.0
10.5
MET-93
GLY-94
3.5
3.7
0.4
4.0
77.2
78.3
46.6
GLY-94
PHE-95
0.8
1.0
11.3
-10.5
25.9
30.8
36.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
SER-115
GLN-116
16.4
16.1
-11.9
34.8
105.3
99.6
195.4
GLN-116
LEU-117
16.1
16.5
-3.4
-7.4
99.7
109.1
6.3
LEU-117
GLN-118
12.6
13.2
-9.3
29.7
157.2
159.6
398.7
GLN-118
ALA-119
13.1
13.3
9.3
5.0
62.3
53.8
-23.8
ALA-119
ASN-120
10.4
11.5
16.7
-50.3
58.5
73.6
-219.8
ASN-120
ALA-121
9.2
9.1
-48.1
31.0
160.2
148.1
-313.7
ALA-121
TYR-122
7.5
7.4
-14.6
15.2
74.9
71.8
1.8
TYR-122
CYS-123
4.0
3.9
3.2
-11.9
116.2
119.3
55.3
CYS-123
GLU-124
3.3
3.3
0.6
7.7
155.0
149.8
-47.6
GLU-124
ASN-125
5.4
5.9
7.4
-14.9
130.0
137.0
-31.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-126
ASP-127
2.5
2.4
2.3
5.5
90.1
91.6
-37.6
ASP-127
ILE-128
2.7
2.6
-6.8
9.4
20.9
24.8
14.2
ILE-128
VAL-129
5.2
5.2
-8.9
2.0
78.1
77.9
-90.9
VAL-129
LEU-130
7.7
7.6
-15.5
8.3
39.6
33.8
92.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-175
THR-176
11.7
11.5
8.4
-4.9
36.1
36.6
63.1
THR-176
LEU-177
10.9
10.9
11.2
-10.9
73.8
70.8
97.4
LEU-177
LEU-178
7.1
7.1
7.9
0.8
59.6
64.3
45.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-180
ILE-181
7.0
6.6
-13.2
7.3
76.3
74.7
89.2
ILE-181
MET-182
5.1
5.1
3.1
-12.1
133.4
133.6
111.8
MET-182
LYS-183
8.3
8.3
-1.4
5.1
20.6
19.5
-43.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees