Neurotrophic Factor Artemin, Isoform 3

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-36   ARG-37  5.5 5.2 51.5 -56.3 51.1 47.8 -30.2
 ARG-37   ARG-38  3.0 3.8 103.6 -65.9 60.0 59.1 128.0
 ARG-38   ALA-39  6.3 6.8 -38.7 2.7 54.7 85.8 19.9
 ALA-39   ARG-40  7.5 8.5 24.7 12.9 98.3 90.7 80.0
 ARG-40   SER-41  5.6 6.3 -14.2 3.6 94.7 79.2 -51.5
 SER-41   PRO-42  8.8 8.6 -15.4 7.7 123.0 110.9 -35.3
 PRO-42   HIS-43  10.9 10.9 -12.6 8.0 62.4 57.0 -4.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-63   PRO-64  10.4 10.8 -2.1 25.9 92.9 86.2 -17.0
 PRO-64   VAL-65  7.5 8.1 -1.5 -14.6 42.1 48.4 79.9
 VAL-65   SER-66  4.3 4.9 -7.6 1.6 52.0 56.3 -10.8
 SER-66   GLN-67  4.1 4.3 1.6 18.8 102.4 106.1 13.0
 GLN-67   PRO-68  1.9 1.0 -9.2 5.0 148.3 152.2 -23.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees