Glutamate Receptor Ionotropic, Nmda 2A
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-132
GLU-133
6.6
6.6
-1.3
0.0
43.3
43.6
45.3
GLU-133
THR-134
4.1
4.1
-9.4
10.9
82.8
83.9
5.1
THR-134
GLY-135
1.4
1.2
0.3
4.6
146.9
144.9
-73.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-168
VAL-169
15.0
15.1
5.0
-2.9
90.5
91.0
-64.7
VAL-169
PRO-170
15.9
16.0
4.8
15.4
18.8
16.9
348.9
PRO-170
ASN-171
16.7
17.3
-20.1
-2.5
102.9
98.7
-204.3
ASN-171
GLY-172
16.4
16.2
11.0
4.3
78.1
68.0
28.7
ASN-171
GLY-172
16.4
16.2
11.0
4.3
78.1
68.0
28.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-171
GLY-172
16.4
16.2
11.0
4.3
78.1
68.0
28.7
ASN-171
GLY-172
16.4
16.2
11.0
4.3
78.1
68.0
28.7
GLY-172
SER-173
13.1
13.0
-12.4
2.5
64.7
60.9
94.9
SER-173
THR-174
9.4
9.3
-3.2
1.2
99.0
92.0
-17.4
THR-174
GLU-175
9.2
9.0
-0.5
0.5
45.3
43.5
9.8
GLU-175
ARG-176
12.1
12.0
-0.5
3.1
26.0
24.9
-62.9
ARG-176
ASN-177
10.3
10.3
-3.0
-0.8
80.1
76.8
24.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-190
ARG-191
20.6
20.9
-5.0
-14.1
58.0
52.5
238.4
ARG-191
PHE-192
24.0
24.1
10.3
-5.2
168.3
167.5
-138.6
PHE-192
ASN-193
22.0
22.2
-11.3
-22.8
81.3
74.2
393.6
ASN-193
GLN-194
20.3
20.0
21.5
-11.5
23.8
40.7
373.1
ASN-193
GLN-194
20.3
20.0
21.5
-11.5
23.8
40.7
373.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-193
GLN-194
20.3
20.0
21.5
-11.5
23.8
40.7
373.1
ASN-193
GLN-194
20.3
20.0
21.5
-11.5
23.8
40.7
373.1
GLN-194
ARG-195
19.8
20.0
5.5
6.3
93.3
93.4
38.5
ARG-195
GLY-196
21.1
21.2
-4.0
-0.7
111.4
108.6
-51.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-241
THR-242
2.8
3.0
1.4
-2.1
138.5
138.0
-0.4
THR-242
THR-243
3.0
3.3
1.7
-1.5
72.6
73.0
-6.6
THR-243
GLY-244
3.7
3.8
-0.6
-3.3
26.6
27.2
71.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-280
THR-281
4.9
5.1
0.6
1.3
63.3
64.4
-55.5
THR-281
GLY-282
1.7
2.1
4.5
-2.5
45.4
44.6
31.6
GLY-282
ILE-283
3.5
4.0
9.9
2.3
49.6
46.1
195.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees