Delta Crystallin I

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 MET-368   LEU-369  5.5 5.0 11.3 -9.4 117.7 113.4 5.4
 LEU-369   ALA-370  3.4 3.4 -2.8 -4.0 46.4 49.3 39.5
 ALA-370   THR-371  6.4 6.4 -2.3 3.2 24.9 24.5 8.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-423   VAL-424  15.0 15.3 -18.6 9.7 100.4 97.5 -51.1
 VAL-424   SER-425  12.0 12.5 2.4 -12.5 143.3 146.9 61.1
 SER-425   GLN-426  11.1 11.5 4.8 2.7 80.8 89.1 -5.8
 GLN-426   VAL-427  9.9 10.3 -0.5 5.1 114.7 113.9 14.8
 VAL-427   PHE-428  7.0 7.4 -4.0 2.5 43.3 45.1 4.9
 PHE-428   ASN-429  5.7 5.9 3.5 -9.2 124.6 127.5 17.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees