Apolactoferrin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-344   VAL-345  6.7 7.0 105.0 -96.0 39.3 47.2 264.7
 VAL-345   VAL-346  4.8 4.7 0.0 -11.0 107.0 99.8 57.6
 VAL-346   TRP-347  2.0 1.6 -13.5 29.3 102.4 108.4 62.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-601   ASP-602  13.5 13.8 22.1 26.3 60.0 57.7 374.7
 ASP-602   ARG-603  13.5 13.5 -127.4 104.8 128.0 169.3 -330.5
 ARG-603   ALA-604  11.4 11.5 34.7 -5.0 53.9 58.9 126.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-613   GLN-614  12.0 11.1 -1.4 3.9 79.5 81.0 -51.1
 GLN-614   GLN-615  8.8 8.2 0.1 -21.6 99.5 106.8 52.5
 GLN-615   ASP-616  11.1 11.1 27.7 -4.8 162.4 147.8 -265.2
 ASP-616   GLN-617  12.4 12.6 -19.4 -9.7 51.7 41.4 333.0
 GLN-617   PHE-618  8.8 9.4 -31.9 25.3 87.7 93.1 119.6
 PHE-618   GLY-619  10.2 9.5 138.6 -141.2 81.3 62.3 -8.6
 GLY-619   GLY-620  13.7 12.9 63.5 9.1 128.8 120.8 -430.7
 GLY-620   ASN-621  16.9 16.4 -61.9 8.7 65.8 15.1 578.8
 ASN-621   GLY-622  17.4 16.2 80.6 15.3 141.5 105.2 -644.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-623   ASP-624  12.7 11.3 10.3 -32.8 80.5 92.6 -18.2
 ASP-624   CYS-625  9.3 8.5 46.4 -8.3 52.1 51.9 238.6
 CYS-625   PRO-626  11.2 11.2 -23.0 -8.5 51.3 68.3 155.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-676   SER-677  18.4 18.7 -13.0 22.8 133.1 110.6 103.4
 SER-677   SER-678  15.2 15.1 -14.5 -11.0 104.6 119.8 -58.1
 SER-678   PRO-679  12.2 12.6 11.8 -6.8 115.0 108.4 -96.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-682   ALA-683  8.1 8.0 13.5 -4.0 95.4 96.3 33.3
 ALA-683   CYS-684  4.6 4.4 11.9 -14.9 105.8 104.6 48.4
 CYS-684   ALA-685  6.7 6.2 25.4 -14.7 37.5 45.0 81.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees