Antibody, Light Chain

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-110   VAL-111  16.1 16.1 -0.7 0.0 154.0 153.7 -11.2
 VAL-111   SER-112  16.7 16.7 -0.5 7.0 108.0 108.2 -6.4
 SER-112   SER-113  14.0 14.0 -5.5 7.1 166.1 171.1 44.1
 SER-113   ALA-114  12.8 13.2 -30.8 41.3 98.9 101.5 -10.8
 ALA-114   LYS-115  9.1 9.5 27.7 -16.8 113.4 99.1 -17.4
 LYS-115   THR-116  9.3 9.1 -20.5 5.8 66.0 62.9 76.7
 THR-116   THR-117  8.6 8.7 -4.6 5.9 102.1 101.7 7.2
 THR-117   ALA-118  5.8 5.8 -1.3 0.9 47.9 48.3 2.9
 ALA-118   PRO-119  7.7 7.7 -0.4 0.4 55.7 55.5 0.3

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Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees