Aromatic Amino Acid Aminotransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-33   ASP-34  12.5 12.4 -40.3 40.6 44.6 51.5 35.6
 ASP-34   LEU-35  11.1 11.5 -1.9 -13.1 98.9 91.7 -13.6
 LEU-35   GLY-36  7.5 8.0 23.2 -11.9 134.5 140.2 -70.7
 GLY-36   VAL-37  8.8 9.4 -83.4 7.8 108.2 98.7 -84.5
 VAL-37   GLY-38  10.8 11.7 -0.9 20.4 86.0 132.5 78.7
 GLY-38   VAL-39  11.2 11.0 79.3 -22.0 37.8 37.6 381.0
 VAL-39   TYR-40  12.4 12.4 -23.6 -6.1 140.3 137.4 -190.8
 TYR-40   LYS-41  10.8 10.7 2.0 4.5 55.7 55.2 24.3
 LYS-41   ASP-42  10.6 10.3 11.1 -0.6 40.5 36.3 35.5
 ASP-42   ALA-43  9.3 9.2 -13.2 4.6 99.8 91.5 -17.7
 ALA-43   THR-44  8.2 7.7 9.7 -18.3 95.1 97.0 13.9
 THR-44   GLY-45  12.0 11.5 30.1 -26.8 156.4 149.8 -11.6
 GLY-45   HIS-46  12.4 12.0 15.8 -17.9 99.3 92.3 -5.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-332   LEU-333  4.8 4.4 8.2 -10.9 56.7 59.6 -13.6
 LEU-333   ARG-334  2.2 1.9 4.2 -1.0 39.5 39.9 27.9
 ARG-334   GLU-335  4.6 4.3 8.9 -1.9 105.6 103.6 0.5
 GLU-335   GLN-336  7.7 7.3 -13.0 12.4 79.9 86.2 12.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-338   GLY-339  9.3 8.7 11.7 -5.9 60.7 61.8 18.9
 GLY-339   GLU-340  11.5 11.0 -1.7 3.7 78.8 77.2 -4.9
 GLU-340   LEU-341  11.6 11.3 -9.1 8.7 26.5 27.3 -3.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-348   ARG-349  16.4 16.8 147.8 53.7 32.3 79.0 -606.5
 ARG-349   PHE-350  14.8 14.1 10.7 27.6 97.3 111.1 -4.4
 PHE-350   GLY-351  11.3 10.9 -2.5 -14.8 47.6 46.1 89.7
 GLY-351   PHE-352  12.2 11.5 4.8 2.3 77.2 76.7 19.1
 PHE-352   VAL-353  10.4 9.9 -0.7 4.4 59.6 58.0 -35.6
 VAL-353   ALA-354  7.1 6.8 -18.2 16.6 35.4 39.6 10.3
 ALA-354   GLU-355  9.2 8.8 5.0 -7.2 75.9 76.2 -12.4
 GLU-355   HIS-356  11.4 11.1 0.6 -4.8 70.4 68.6 -11.0
 HIS-356   ARG-357  9.0 8.8 -11.4 7.4 44.3 42.4 28.6
 ARG-357   GLY-358  9.7 9.8 -13.3 31.9 107.3 108.6 39.2
 GLY-358   MET-359  8.9 8.9 30.6 -24.5 102.5 110.6 23.5
 MET-359   PHE-360  6.5 6.9 -15.9 3.3 140.2 132.0 -97.7
 PHE-360   SER-361  5.0 4.9 9.6 -5.1 73.4 79.8 6.3
 SER-361   ARG-362  3.1 3.1 -7.0 11.5 140.3 140.1 67.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-382   GLY-383  7.1 7.3 -22.3 27.4 47.1 45.6 -55.9
 GLY-383   ASP-384  6.6 6.8 -13.7 2.5 80.4 80.6 12.2
 ASP-384   SER-385  2.9 3.1 14.6 -1.7 39.5 37.2 93.1
 SER-385   ARG-386  3.0 3.0 -11.7 7.5 135.1 137.5 -72.0
 ARG-386   ILE-387  2.6 2.8 -2.6 -1.4 144.9 145.3 -18.4
 ILE-387   ASN-388  3.1 3.2 -22.2 21.5 128.9 131.4 24.5
 ASN-388   ILE-389  4.6 4.9 -14.2 -2.9 146.4 147.7 -148.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-391   LEU-392  6.5 7.0 78.0 -77.5 66.0 85.8 17.3
 LEU-392   ASN-393  4.7 5.4 -10.7 19.2 179.8 163.4 66.5
 ASN-393   ASP-394  5.4 5.4 -5.1 -9.7 101.7 96.9 -31.9
 ASP-394   ASN-395  7.3 6.7 21.8 -5.8 113.3 94.5 -24.3
 ASN-395   THR-396  10.4 10.0 14.2 -27.6 176.5 165.3 115.7
 THR-396   ILE-397  9.4 9.7 15.8 -7.1 115.4 123.0 -68.2
 ILE-397   PRO-398  7.8 7.7 0.7 -2.9 105.7 106.5 -5.4
 PRO-398   ILE-399  11.5 11.3 7.7 -0.9 148.8 138.9 -30.8
 ILE-399   LEU-400  12.6 12.6 7.3 -6.2 146.2 151.5 -40.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees