Acriflavine Resistance Protein A

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-103   THR-104  5.2 6.1 9.7 -10.1 29.9 27.0 -2.8
 THR-104   TYR-105  4.8 5.8 10.0 -4.1 83.7 82.2 33.2
 TYR-105   ASP-106  2.6 2.7 8.1 -10.6 122.9 118.9 0.0
 ASP-106   SER-107  0.4 1.6 14.5 -13.1 65.0 65.8 -11.3
 SER-107   ALA-108  3.1 4.7 19.1 -16.7 34.8 32.5 17.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-165   THR-166  5.2 4.3 6.4 -0.4 91.8 97.1 -3.7
 THR-166   ALA-167  4.9 4.7 1.6 6.4 24.8 25.1 42.1
 ALA-167   ARG-168  4.9 4.7 -9.6 9.1 113.8 118.8 1.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees