Iron(III) Dicitrate Transport Protein Feca

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-520   SER-521  6.0 5.6 9.0 -14.3 46.8 41.2 3.1
 SER-521   GLN-522  5.7 4.5 -7.7 31.5 111.6 100.4 6.6
 GLN-522   ILE-523  2.0 0.7 -21.0 3.4 103.1 109.3 -2.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-527   GLN-528  7.2 7.2 177.6 -7.6 110.9 137.5 231.4
 GLN-528   SER-529  10.7 6.6 -21.0 8.9 115.0 104.3 -11.3
 SER-529   GLY-530  11.4 8.9 -25.3 -21.6 77.2 108.4 -3.0
 GLY-530   ASN-531  9.7 11.0 90.6 6.4 76.5 8.4 160.4
 ASN-531   VAL-532  6.9 10.6 -50.4 -19.4 149.8 119.2 -81.7
 VAL-532   GLU-533  4.6 9.1 -55.2 179.7 139.8 161.3 -451.2
 GLU-533   PRO-534  4.5 9.3 -22.0 4.1 90.4 117.1 318.6
 PRO-534   GLU-535  5.2 6.6 -1.2 24.2 119.0 96.9 3.7
 GLU-535   LYS-536  5.4 5.8 15.1 -9.6 28.7 20.9 4.6
 LYS-536   ALA-537  7.8 8.2 -1.9 14.1 123.0 124.5 1.5
 ALA-537   ARG-538  8.6 8.8 6.6 -9.0 24.8 33.1 0.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-559   ILE-560  14.4 14.3 -4.1 9.2 123.7 124.1 2.7
 ILE-560   ASN-561  12.1 12.0 -1.6 0.9 154.2 150.5 -2.7
 ASN-561   PHE-562  12.9 13.0 -19.2 6.9 125.0 122.3 -12.5
 PHE-562   ASN-563  10.6 10.2 -22.0 -48.7 148.1 160.4 -110.9
 ASN-563   ASN-564  11.2 10.9 -146.0 -149.0 135.5 128.8 109.8
 ASN-564   GLN-565  9.8 9.4 -138.6 78.6 74.0 95.1 9.6
 GLN-565   TYR-566  8.3 7.0 1.1 49.2 151.2 167.5 -91.7
 GLN-565   TYR-566  8.3 7.0 1.1 49.2 151.2 167.5 -91.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-565   TYR-566  8.3 7.0 1.1 49.2 151.2 167.5 -91.7
 GLN-565   TYR-566  8.3 7.0 1.1 49.2 151.2 167.5 -91.7
 TYR-566   ASP-567  7.5 5.1 -161.1 -5.6 98.5 70.7 84.7
 ASP-567   SER-568  9.8 7.3 -140.7 102.3 66.2 94.3 103.6
 SER-568   ASN-569  10.1 10.5 -155.3 -137.6 31.3 106.8 -63.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-576   ALA-577  10.5 10.3 -125.7 5.9 131.5 144.0 426.1
 ALA-577   ARG-578  10.4 11.2 -47.2 34.8 127.4 144.5 -23.7
 ARG-578   GLY-579  13.1 10.3 167.9 -169.8 71.4 50.0 10.1
 GLY-579   LYS-580  13.3 11.1 -36.9 -85.7 170.9 145.0 -225.2
 LYS-580   THR-581  13.9 13.0 -21.8 0.8 118.8 122.5 -10.7
 THR-581   ARG-582  14.5 14.0 0.0 1.9 20.1 22.2 2.5
 ARG-582   HIS-583  15.5 15.3 0.2 -5.8 55.2 56.1 1.1
 HIS-583   THR-584  14.9 14.8 5.8 -7.0 24.3 24.3 -3.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees