Mlc Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-191   ILE-192  9.7 9.8 -9.1 2.0 75.3 72.9 21.2
 ILE-192   GLN-193  6.9 7.1 13.4 -33.7 160.0 167.3 72.8
 GLN-193   HIS-194  5.0 5.4 13.5 -15.3 107.4 100.8 -6.9
 HIS-194   ASP-195  2.3 2.2 -5.5 5.5 96.5 94.5 51.5
 ASP-195   ILE-196  1.5 2.3 8.9 -6.7 124.5 134.9 -22.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-387   ALA-388  8.8 9.2 7.3 1.7 55.8 57.0 13.8
 ALA-387   ALA-388  8.8 9.2 7.3 1.7 55.8 57.0 13.8
 GLN-377   PHE-378  17.0 17.1 10.7 -4.7 142.1 143.4 -21.3
 PHE-378   SER-379  14.6 14.6 -25.0 11.4 114.7 112.3 -38.9
 SER-379   ASN-380  12.7 13.4 -6.3 0.7 75.9 75.5 0.5
 ASN-380   GLN-381  9.7 10.1 -15.3 12.3 46.4 61.0 69.8
 GLN-381   GLY-382  10.1 10.9 -176.0 138.8 49.8 51.7 87.2
 GLY-382   THR-383  9.2 8.6 45.6 -4.4 76.6 69.6 20.6
 ALA-385   GLY-386  8.9 8.5 -57.2 33.9 67.9 69.2 16.4
 GLY-386   ALA-387  8.7 7.5 -18.2 11.9 91.8 87.4 -6.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees