Occludin

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-447   SER-448  3.0 2.8 -3.6 4.0 71.2 72.2 19.5
 SER-448   GLU-449  1.1 0.7 4.0 -2.9 49.5 47.1 -8.2
 GLU-449   LEU-450  2.4 2.6 -1.0 3.5 140.8 130.6 -1.9
 LEU-450   ASP-451  1.6 2.0 -7.8 4.6 75.6 66.8 38.4
 ASP-451   GLU-452  4.7 4.8 -13.6 -4.4 86.1 85.2 35.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-490   ALA-491  4.3 4.2 3.0 -8.9 81.5 79.9 -7.8
 ALA-491   ASP-492  5.3 5.0 2.5 -1.6 13.5 18.2 11.4
 ASP-492   TYR-493  6.2 6.3 17.0 -10.8 60.8 55.4 31.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees