Penicillin-Binding Protein-Related Factor A
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-55
PRO-56
5.6
5.7
1.6
0.0
77.7
80.9
-11.5
PRO-56
THR-57
2.2
1.9
5.7
5.7
8.0
16.6
35.0
THR-57
PRO-58
3.1
2.2
4.4
-16.3
65.2
62.0
4.7
PRO-58
VAL-59
0.3
0.6
0.9
-5.4
65.2
60.7
0.1
VAL-59
GLN-60
3.9
3.9
20.6
-10.0
62.2
72.0
31.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-78
PHE-79
7.7
7.5
-1.1
6.9
111.9
113.4
6.8
PHE-79
ARG-80
5.2
4.7
-8.4
-6.9
44.9
48.8
46.2
ARG-80
GLN-81
1.8
1.2
10.2
-13.8
95.7
85.9
-10.3
GLN-81
ALA-82
3.6
2.7
5.0
6.3
44.8
53.9
0.0
ALA-82
SER-83
5.3
4.9
0.2
0.1
112.3
122.6
13.8
SER-83
THR-84
7.7
7.8
6.8
-8.6
54.8
58.5
21.3
THR-84
THR-85
9.9
9.9
-7.7
-0.2
111.3
115.7
-2.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees