Yhdh

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-25   PRO-26  8.1 8.2 7.3 -0.6 111.7 112.2 -24.6
 PRO-26   GLU-27  6.2 6.7 1.1 -13.3 60.3 55.7 -40.4
 GLU-27   GLY-28  8.9 9.5 12.8 6.1 26.3 42.2 162.1
 GLY-28   ASP-29  9.4 9.6 -5.2 35.1 123.9 137.0 208.3
 ASP-29   VAL-30  12.0 11.8 -33.4 7.8 148.8 140.0 -190.1
 VAL-30   THR-31  9.8 9.6 -4.2 7.3 72.3 72.5 -13.9
 THR-31   VAL-32  9.0 9.0 1.1 -1.8 29.5 29.2 -6.9
 VAL-32   ASP-33  7.1 7.1 1.0 -2.9 96.2 96.1 -24.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-63   ASP-64  6.7 6.7 9.9 -2.2 23.6 21.3 63.0
 ASP-64   PHE-65  5.8 5.7 6.4 -8.7 80.7 84.9 -38.4
 PHE-65   ALA-66  3.8 3.7 2.7 -2.4 33.0 29.3 -8.1
 ALA-66   GLY-67  2.9 2.9 -5.7 3.8 96.1 95.1 13.1
 GLY-67   THR-68  5.1 5.0 -14.1 6.4 109.5 111.9 -1.0
 THR-68   VAL-69  7.4 7.3 -2.2 2.6 41.7 42.1 -4.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-79   GLY-80  13.2 13.0 2.4 5.9 149.8 154.8 -57.4
 GLY-80   GLN-81  11.3 11.4 -3.3 -2.1 69.0 71.3 45.7
 GLN-81   GLU-82  8.5 8.4 6.7 -2.6 68.4 71.0 43.3
 GLU-82   VAL-83  4.9 4.8 -8.1 5.4 110.6 116.4 -17.5
 VAL-83   LEU-84  3.1 3.0 -1.5 -0.1 111.5 110.9 54.6
 LEU-84   LEU-85  1.4 1.5 -2.7 -2.5 39.6 38.6 38.5
 LEU-84   LEU-85  1.4 1.5 -2.7 -2.5 39.6 38.6 38.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-84   LEU-85  1.4 1.5 -2.7 -2.5 39.6 38.6 38.5
 LEU-84   LEU-85  1.4 1.5 -2.7 -2.5 39.6 38.6 38.5
 LEU-85   THR-86  3.2 3.3 -0.8 -4.5 75.4 74.6 11.3
 THR-86   GLY-87  6.3 6.5 -13.1 3.9 44.5 45.6 61.0
 GLY-87   TRP-88  8.0 8.1 6.1 -4.5 125.5 122.0 -33.6
 TRP-88   GLY-89  8.1 8.6 8.2 -3.8 155.4 156.5 -28.5
 GLY-89   VAL-90  7.0 7.4 -1.3 -3.3 94.9 91.2 -34.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-102   ARG-103  5.2 5.1 11.6 -11.1 88.8 88.8 17.0
 ARG-103   VAL-104  6.3 6.3 6.1 -10.5 99.9 100.7 52.5
 VAL-104   LYS-105  5.8 5.8 -0.7 -0.5 103.3 103.5 -18.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-108   LEU-109  8.0 7.8 2.2 1.7 145.0 146.7 -33.1
 LEU-109   VAL-110  6.2 6.2 -0.9 -5.3 32.3 34.7 57.0
 VAL-110   ALA-111  6.4 6.5 -4.3 -0.2 48.5 47.8 16.8
 ALA-111   MET-112  6.2 6.2 5.2 -0.8 124.9 127.2 -35.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-285   LEU-286  15.2 15.2 -11.3 -2.2 107.5 104.3 -26.7
 LEU-286   PRO-287  14.4 14.4 -5.5 -7.7 33.7 40.8 96.4
 PRO-287   GLU-288  15.5 15.1 -7.7 3.5 95.6 107.7 -53.6
 GLU-288   SER-289  13.8 13.5 2.7 -1.0 63.0 67.5 -6.9
 SER-289   PHE-290  17.2 17.2 -0.9 2.5 177.9 168.4 12.4
 PHE-290   TYR-291  16.3 16.9 -2.4 15.5 111.3 122.4 68.5
 TYR-291   THR-292  13.5 14.5 2.7 -16.3 95.4 87.8 33.8
 THR-292   GLN-293  16.0 17.4 -26.0 -21.4 130.2 114.9 -223.2
 GLN-293   ALA-294  18.4 20.3 -172.7 -46.0 121.7 174.1 1197.8
 ALA-294   ALA-295  19.8 19.0 -143.8 40.7 155.4 125.2 -689.5
 ALA-295   LYS-296  17.7 16.9 -1.9 -47.9 115.9 110.9 -237.3
 LYS-296   GLU-297  19.0 18.6 -11.2 8.1 108.8 117.7 -76.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-308   ALA-309  22.1 21.9 -3.8 7.3 132.4 132.0 10.5
 ALA-309   ILE-310  23.8 23.6 -2.6 8.8 107.5 101.8 22.0
 ILE-310   ILE-311  21.6 21.5 -21.7 11.2 48.1 46.5 69.6
 ILE-311   ASN-312  22.4 22.5 13.7 -6.8 89.4 90.1 36.9
 ASN-312   ASN-313  26.2 26.1 7.8 -1.8 21.8 31.9 27.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-314   ILE-315  26.8 26.6 15.6 3.3 147.9 137.1 -101.2
 ILE-315   GLN-316  24.0 23.8 27.7 -41.8 128.2 138.8 54.8
 GLN-316   GLY-317  23.8 23.5 -3.8 5.3 66.4 62.1 18.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees