Programmed Cell Death 6-Interacting Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-378   ASN-379  9.2 8.8 1.8 2.8 25.2 22.7 35.2
 ASN-379   ARG-380  9.0 8.8 4.4 4.2 76.2 77.4 60.1
 ARG-380   SER-381  11.0 10.6 -15.0 -0.9 63.2 69.9 -43.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-575   VAL-576  6.2 7.5 -34.8 14.1 159.0 147.0 -226.6
 VAL-576   ASN-577  6.8 8.1 -8.3 1.6 90.5 81.4 -137.5
 ASN-577   PHE-578  10.2 11.8 56.8 -25.3 34.0 31.7 344.5
 PHE-578   ASP-579  11.5 13.7 4.8 1.5 109.4 98.0 3.4
 THR-581   SER-582  19.4 22.6 -8.3 1.0 136.1 159.4 -75.9
 SER-582   LYS-583  20.8 22.7 18.7 -29.1 51.8 71.6 33.9
 LYS-583   PHE-584  20.1 22.1 6.9 2.6 113.3 114.3 -21.6
 PHE-584   LEU-585  22.2 24.8 8.9 -0.9 88.2 62.6 38.8
 LEU-585   THR-586  25.0 27.0 -20.3 11.4 154.8 154.3 -39.9
 THR-586   ALA-587  25.3 26.2 -7.1 8.1 98.5 89.6 -23.2
 ALA-587   LEU-588  25.8 27.2 -17.4 17.8 60.9 82.0 2.7
 LEU-588   ALA-589  28.4 30.4 -24.6 17.6 115.7 142.0 10.4
 ALA-589   GLN-590  30.0 31.1 30.0 -42.7 43.2 44.9 -100.4
 GLN-590   ASP-591  29.9 30.8 1.5 9.8 103.1 104.3 1.0
 ASP-591   GLY-592  31.5 32.6 -177.2 156.1 27.9 52.7 224.6
 GLY-592   VAL-593  34.0 34.5 118.8 -61.6 136.4 156.1 -642.0
 VAL-593   ILE-594  33.4 33.3 32.6 17.0 62.8 101.5 167.5
 ILE-594   ASN-595  30.4 30.0 -55.6 -13.3 49.1 58.3 447.8
 ASN-595   GLU-596  28.5 28.8 1.4 10.4 107.0 111.6 -48.6
 GLU-596   GLU-597  25.7 26.0 -1.3 1.6 71.6 85.3 -19.4
 GLU-597   ALA-598  24.5 24.9 -5.9 -6.1 135.6 141.8 -49.3
 ALA-598   LEU-599  24.4 24.6 8.4 -8.4 56.8 61.6 -21.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-606   VAL-607  12.4 12.7 0.0 -14.4 109.5 108.7 15.4
 VAL-607   TYR-608  9.9 10.2 29.6 -12.5 54.7 45.1 72.2
 TYR-608   GLY-609  9.2 9.3 -16.2 8.5 81.0 80.9 53.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees