Retinoid X Receptor-Alpha
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-244
LEU-245
4.4
4.0
4.5
9.8
80.1
88.4
2.4
LEU-245
ALA-246
0.8
0.9
0.8
-8.3
60.6
63.3
-0.4
ALA-246
VAL-247
3.1
2.7
47.0
-57.4
7.9
4.6
-9.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-281
PHE-282
6.3
6.6
-12.9
-0.2
103.3
147.8
-11.5
PHE-282
THR-283
6.4
6.1
-9.6
45.1
166.6
145.4
32.2
THR-283
LEU-284
6.0
3.8
-17.2
-27.6
119.5
110.8
-11.5
LEU-284
VAL-285
7.9
7.5
-27.6
5.6
118.6
116.5
-15.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-436
CYS-437
20.6
21.1
15.1
-6.2
69.2
71.4
7.8
CYS-437
LEU-438
16.7
17.3
-30.5
17.1
126.5
129.9
-2.5
LEU-438
GLU-439
17.0
17.0
-14.9
-7.1
164.8
152.8
-17.1
GLU-439
HIS-440
18.6
19.7
11.5
-15.2
59.1
59.5
-3.2
HIS-440
LEU-441
15.4
17.7
-10.9
141.4
95.2
102.0
23.2
LEU-441
PHE-442
13.1
14.0
24.8
19.8
18.0
121.9
20.7
PHE-442
PHE-443
13.4
13.9
1.7
19.0
74.4
110.7
-8.4
PHE-443
PHE-444
11.3
10.6
-6.1
33.8
52.0
139.2
5.0
PHE-444
LYS-445
9.1
9.2
-118.4
-24.1
85.8
111.7
-114.7
LYS-445
LEU-446
7.4
10.2
-110.8
17.2
43.5
44.5
51.1
LEU-446
ILE-447
6.6
10.4
145.1
-106.1
82.9
85.5
26.4
ILE-447
GLY-448
6.5
6.8
-63.3
-174.3
154.2
151.8
99.2
GLY-448
ASP-449
6.5
7.0
-33.3
-138.1
111.3
113.1
-140.4
ASP-449
THR-450
9.2
10.5
-48.0
-14.2
70.5
91.6
-37.3
THR-450
PRO-451
11.5
10.6
174.9
7.6
120.0
56.8
112.5
PRO-451
ILE-452
14.3
7.9
165.3
-5.3
168.3
20.4
-31.1
ILE-452
ASP-453
13.6
8.7
42.7
-29.8
123.2
83.3
-8.2
ASP-453
THR-454
16.8
12.3
-8.1
-1.9
99.0
92.1
0.5
THR-454
PHE-455
17.1
12.9
22.1
-9.9
117.9
31.5
9.3
PHE-455
LEU-456
13.7
11.0
3.9
-16.8
172.5
37.1
6.3
LEU-456
MET-457
14.4
12.9
21.6
-14.3
107.5
96.1
-6.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees