Recombination Protein Recr

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-53   LEU-54  4.5 4.3 16.4 -12.6 156.8 157.8 -59.8
 LEU-54   HIS-55  2.2 2.1 21.8 -27.4 124.1 123.4 44.9
 HIS-55   VAL-56  4.2 4.0 -16.0 18.5 23.5 22.3 -28.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-61   ASN-62  2.3 2.4 -18.8 -2.4 55.0 63.6 144.5
 ASN-62   ILE-63  1.2 1.1 17.0 -2.8 159.1 162.0 -106.0
 ILE-63   THR-64  1.1 1.1 13.6 -9.6 109.9 101.5 37.0
 THR-64   ASP-65  4.0 3.7 -23.0 11.5 41.4 34.6 96.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees