Cpn60(groel)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-187   PHE-188  5.6 5.6 1.3 -0.7 65.4 64.9 -0.8
 PHE-188   VAL-189  2.7 2.7 -0.2 -3.4 48.6 48.7 18.9
 VAL-189   GLU-190  0.4 0.4 15.0 -8.4 64.8 64.3 89.9
 GLU-190   GLY-191  4.1 4.1 -2.9 -3.7 104.6 105.8 -18.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-370   LEU-371  7.2 7.2 -1.6 -0.3 157.4 158.2 -22.4
 LEU-371   ALA-372  8.8 8.8 2.5 -2.5 80.9 82.5 -7.5
 ALA-372   GLY-373  8.2 8.1 0.1 3.6 105.0 105.7 -66.6
 GLY-373   GLY-374  5.2 5.3 13.3 0.0 53.3 50.2 146.0
 GLY-374   VAL-375  3.9 3.9 -7.4 -1.3 69.4 66.7 26.2
 VAL-375   ALA-376  2.1 2.1 2.0 -1.3 82.4 82.3 1.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees