Bifunctional Glutathionylspermidine Synthetase/amidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-493   ILE-494  14.8 14.5 5.5 -14.0 99.1 94.0 2.9
 ILE-494   PRO-495  11.0 10.7 -7.6 -13.2 25.7 25.3 120.5
 PRO-495   GLY-496  10.0 9.9 19.7 -8.0 144.1 138.4 -56.7
 GLY-496   ASN-497  12.0 12.6 10.6 -21.3 93.1 92.2 -25.0
 ASN-497   LYS-498  11.5 11.8 7.2 -5.7 112.9 118.5 -21.2
 LYS-498   ALA-499  9.6 9.9 7.8 -7.3 51.0 58.3 9.9
 ALA-499   ILE-500  9.2 8.9 4.3 5.3 75.9 81.1 2.6
 ILE-500   LEU-501  5.9 5.8 2.3 -7.2 131.6 134.4 6.6
 LEU-501   PRO-502  4.2 4.4 -6.8 1.1 103.3 99.1 5.0
 PRO-502   ILE-503  4.9 4.9 6.8 -3.6 48.6 48.3 26.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TRP-505   SER-506  2.8 2.8 4.3 4.5 129.3 128.4 -42.4
 SER-506   LEU-507  5.1 4.9 -18.4 6.4 66.7 72.4 49.7
 LEU-507   PHE-508  4.8 4.7 -7.6 7.0 129.7 135.1 -8.7
 PHE-508   PRO-509  6.3 6.0 7.6 -8.1 42.6 42.7 -3.7
 PRO-509   HIS-510  7.3 6.9 -0.9 7.9 146.6 148.2 39.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-514   LEU-515  2.5 1.8 -2.6 -2.1 54.7 57.5 9.2
 LEU-515   ASP-516  1.6 1.8 1.3 -2.5 47.8 40.4 -11.3
 ASP-516   THR-517  5.1 5.0 0.0 3.2 71.5 76.0 -46.9
 THR-517   ASP-518  5.9 6.4 4.1 11.8 33.8 30.9 112.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-568   GLN-569  7.7 7.9 -4.1 14.8 158.4 155.9 82.3
 GLN-569   LEU-570  7.1 6.9 -17.9 6.9 129.5 139.1 -63.1
 LEU-570   TRP-571  6.9 7.5 -6.0 7.8 111.5 117.1 18.5
 TRP-571   CYS-572  3.9 4.6 7.6 5.6 74.1 67.4 58.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees