Allophycocyanin
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-42
THR-43
5.0
5.4
5.2
-11.2
105.8
111.8
-3.1
THR-43
ILE-44
3.1
3.2
-15.1
14.5
127.3
127.3
105.3
ILE-44
ALA-45
1.3
1.8
9.1
-10.8
96.3
90.7
-32.2
ALA-45
ALA-46
2.6
2.3
2.4
-8.3
143.7
142.0
96.4
ALA-46
ASN-47
2.2
2.2
19.3
-9.8
86.5
91.8
-76.0
ASN-47
ALA-48
3.6
3.4
-8.1
17.5
151.7
151.7
71.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-91
LEU-92
3.5
3.6
-2.8
9.6
140.4
142.9
43.1
LEU-92
ARG-93
2.5
2.8
-6.9
3.2
98.7
95.3
57.8
ARG-93
TYR-94
2.2
1.9
-0.4
5.4
50.5
46.8
-80.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ILE-106
LEU-107
6.7
6.6
-3.2
13.2
102.8
103.2
-1.5
LEU-107
ASP-108
3.3
3.5
-13.1
9.3
168.7
167.0
-22.7
ASP-108
GLU-109
3.9
3.9
-8.0
-4.5
110.0
106.1
-37.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-138
VAL-139
13.2
13.3
2.1
3.2
31.6
31.0
90.9
VAL-139
THR-140
11.0
11.2
-3.5
3.8
99.3
103.4
5.5
THR-140
SER-141
8.2
8.4
0.3
2.6
72.0
67.7
48.6
SER-141
GLY-142
11.2
11.4
-8.1
27.0
158.7
164.0
307.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
CYS-170
SER-171
9.8
9.4
-2.1
13.3
160.9
156.8
169.2
SER-171
GLY-172
10.4
10.3
-24.9
25.3
135.5
133.4
-57.5
GLY-172
LEU-173
7.0
6.9
-6.8
7.1
97.5
104.2
-42.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees