Leucyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-226   SER-227  10.4 8.6 17.2 -23.3 152.7 148.1 23.3
 SER-227   GLU-228  10.1 8.2 -22.2 -4.2 73.3 79.5 15.3
 GLU-228   GLY-229  9.4 7.6 21.4 -45.9 148.4 172.2 66.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-412   GLY-413  8.2 8.0 9.6 -15.2 108.0 105.6 11.1
 GLY-413   ARG-414  7.5 7.1 -12.1 3.9 50.8 47.2 23.7
 ARG-414   VAL-415  4.3 3.8 41.2 -50.5 110.6 104.7 25.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees