Surface Layer Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-296   SER-297  16.8 16.8 -3.0 -2.2 76.1 73.7 40.1
 SER-297   ILE-298  15.2 15.0 -0.3 3.8 44.2 37.5 -100.9
 ILE-298   PRO-299  12.2 12.1 -0.9 -8.5 49.8 59.8 47.3
 PRO-299   VAL-300  11.3 11.4 18.3 -1.8 82.4 86.5 -6.1
 VAL-300   GLN-301  7.6 7.6 1.0 1.3 27.9 29.5 21.3
 GLN-301   PRO-302  6.0 6.0 -3.1 0.6 87.7 86.7 -10.3
 PRO-302   VAL-303  2.5 2.5 -6.6 7.4 120.8 123.0 5.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-371   GLY-372  4.5 4.6 4.9 -9.3 157.0 159.0 38.6
 GLY-372   THR-373  4.2 4.5 4.0 -2.9 136.5 137.7 -13.2
 THR-373   ASP-374  3.9 4.0 5.4 -5.6 122.4 120.6 -5.1
 ASP-374   SER-375  2.2 2.1 -1.8 3.3 37.2 36.9 -13.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees