Leucyl-Trna Synthetase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-180   HIS-181  3.9 3.8 -28.0 27.4 79.1 84.2 6.0
 HIS-181   ARG-182  0.5 0.3 47.4 -40.9 31.9 20.5 25.7
 ARG-182   VAL-183  3.1 2.2 -46.7 63.4 91.9 94.1 49.1
 VAL-183   ARG-184  5.4 4.9 36.4 -28.2 23.6 23.5 24.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-460   ILE-461  1.6 1.5 -10.4 -7.7 95.7 91.4 -16.6
 ILE-461   HIS-462  3.4 3.9 52.1 -53.2 54.2 35.4 -4.1
 HIS-462   ASP-463  6.6 6.4 67.1 -69.0 41.8 53.9 -3.0
 ASP-463   GLN-464  8.4 8.1 99.1 -92.4 47.9 65.1 51.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees