R-Specific Alcohol Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-184   VAL-185  14.7 14.7 -1.2 -0.3 68.2 69.7 3.1
 VAL-185   HIS-186  11.2 11.1 3.4 -6.7 151.5 150.2 -6.5
 HIS-186   PRO-187  10.7 10.5 2.8 -3.1 112.6 111.4 3.0
 PRO-187   GLY-188  7.1 6.9 -1.5 9.1 7.6 8.2 12.9
 GLY-188   TYR-189  6.1 5.6 4.1 -10.3 90.1 85.5 -1.7
 TYR-189   ILE-190  4.7 4.0 9.2 -3.5 51.7 51.4 22.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-206   GLN-207  2.0 2.1 15.4 -5.5 36.6 30.2 31.9
 GLN-207   ARG-208  0.8 1.2 7.4 -9.5 102.8 100.4 4.1
 ARG-208   THR-209  3.7 3.8 0.5 2.0 78.8 80.9 -8.1
 THR-209   LYS-210  4.4 4.3 2.7 0.6 135.9 138.9 8.4
 LYS-210   THR-211  4.5 4.0 -13.2 7.6 34.4 38.9 14.2
 THR-211   PRO-212  3.7 3.4 5.3 -12.0 70.7 70.2 5.8
 PRO-212   MET-213  6.5 6.4 9.3 0.0 110.9 114.1 -3.7
 MET-213   GLY-214  6.6 6.7 -0.9 -0.5 113.3 113.2 -12.0
 GLY-214   HIS-215  4.7 5.1 2.7 2.2 125.3 125.1 6.5
 HIS-215   ILE-216  3.7 4.3 10.0 -13.3 131.5 127.3 20.8
 ILE-216   GLY-217  1.4 1.9 3.1 0.5 154.9 158.7 -40.3
 GLY-217   GLU-218  1.3 1.6 6.3 -17.3 124.1 122.9 46.4
 GLU-218   PRO-219  3.0 3.2 -2.1 -6.3 38.3 36.1 2.6
 PRO-219   ASN-220  3.0 2.9 4.3 -2.1 127.5 129.4 -8.0
 ASN-220   ASP-221  1.9 1.9 1.3 3.6 70.7 69.4 -11.5
 ASP-221   ILE-222  2.4 2.6 -3.8 5.1 69.2 68.9 11.6
 ILE-222   ALA-223  3.3 3.3 -1.4 5.0 2.3 2.6 -13.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees