Of Elongation Factor Tu (Ef-Tu)

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-210   PRO-211  16.7 16.8 17.1 -20.0 54.6 40.6 -49.4
 PRO-211   THR-212  17.1 17.5 141.0 -65.9 108.5 88.1 -4.9
 THR-212   PRO-213  14.7 15.6 27.0 -44.4 107.9 150.5 153.9
 PRO-213   VAL-214  16.6 13.7 -135.6 40.2 113.7 93.9 -200.4
 VAL-214   ARG-215  18.8 16.4 -7.3 -29.8 44.6 34.0 171.0
 ARG-215   ASP-216  17.8 17.3 98.1 -89.5 92.0 77.8 63.0
 ASP-216   VAL-217  20.7 18.9 50.9 -34.9 97.9 122.5 -94.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-220   PHE-221  23.2 21.8 34.6 -7.3 80.7 76.1 61.7
 PHE-221   LEU-222  19.8 19.0 3.5 -15.9 27.3 42.9 -81.7
 LEU-222   MET-223  17.7 16.7 -24.6 31.7 83.0 85.6 31.6
 MET-223   PRO-224  14.0 13.1 -19.1 19.9 157.4 141.8 -15.1
 PRO-224   VAL-225  12.2 11.3 -32.0 14.6 98.5 98.7 73.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-234   GLY-235  18.3 20.2 -60.6 103.7 142.9 143.3 219.1
 GLY-235   THR-236  16.7 18.3 66.1 -100.5 79.4 73.5 -37.0
 THR-236   VAL-237  14.0 14.5 26.0 -8.1 139.0 127.4 -83.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-241   ILE-242  9.4 8.1 -13.7 -11.8 90.0 76.4 -34.4
 ILE-242   GLU-243  12.7 11.7 22.1 -12.6 87.3 70.5 21.6
 GLU-243   ARG-244  15.4 14.3 -0.1 10.5 139.6 132.9 41.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-290   ARG-291  17.2 17.9 10.1 -23.4 62.7 59.0 61.8
 ARG-291   GLY-292  20.6 21.3 -7.7 46.4 177.8 157.5 195.8
 GLY-292   VAL-293  20.6 21.6 -20.5 -30.8 132.5 122.2 -188.7
 VAL-293   SER-294  17.6 18.0 -44.9 11.6 104.4 87.3 -34.5
 SER-294   ARG-295  15.6 16.2 22.0 -1.3 94.2 77.4 13.4
 ARG-295   GLU-296  11.8 12.6 -7.3 2.6 135.5 145.2 -46.3
 GLU-296   GLU-297  12.2 14.1 42.8 -52.3 108.4 98.2 -16.6
 GLU-297   VAL-298  14.3 15.4 3.1 -28.9 136.0 122.6 145.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees