Carbamate Kinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-124   ALA-125  7.4 6.6 4.0 0.6 72.5 68.2 12.4
 ALA-125   PHE-126  4.2 3.8 1.8 4.2 78.3 76.2 -1.0
 PHE-126   THR-127  6.1 5.0 -21.5 9.8 32.8 40.0 8.8
 THR-127   ASN-128  6.9 5.8 15.6 -12.7 107.8 110.7 -22.1
 ASN-128   PRO-129  3.3 2.3 30.0 -13.3 51.8 44.8 27.3
 PRO-129   THR-130  2.5 2.3 9.3 -48.0 111.4 114.1 41.6
 THR-130   LYS-131  3.3 4.2 47.2 -10.7 52.1 45.2 18.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-166   PRO-167  3.4 3.9 19.4 8.7 70.4 75.0 34.7
 PRO-167   SER-168  1.3 0.9 -10.6 -11.4 57.3 58.9 44.0
 SER-168   PRO-169  3.2 3.0 4.9 1.1 80.0 77.2 14.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees