Cellobiohydrolase II

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-97   GLN-98  7.2 7.5 5.5 -6.1 29.8 30.0 19.7
 GLN-98   LEU-99  9.2 9.6 -4.2 1.5 106.8 110.1 39.9
 LEU-99   TRP-100  8.0 8.4 -5.5 -0.8 99.9 99.4 0.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-132   PRO-133  11.7 11.7 1.3 -0.2 64.3 59.4 21.6
 PRO-133   SER-134  9.8 9.8 -19.5 15.6 64.1 70.7 58.4
 SER-134   PHE-135  8.6 8.5 -7.0 8.6 126.0 128.8 -3.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 CYS-181   ALA-182  23.5 23.3 -5.2 -0.2 162.9 162.0 -35.3
 ALA-182   ALA-183  22.2 21.9 14.8 -63.1 49.9 50.9 -307.5
 ALA-183   ALA-184  20.9 20.9 30.8 -42.3 63.8 99.6 -2.4
 ALA-184   ALA-185  23.1 22.7 1.1 74.7 115.8 113.9 -249.0
 ALA-185   SER-186  23.1 20.2 176.8 25.9 152.1 159.7 1528.4
 SER-186   ASN-187  22.4 19.9 -117.0 43.2 66.5 55.5 274.5
 ASN-187   GLY-188  22.7 23.3 125.9 -22.7 161.2 139.3 -1151.4
 GLY-188   GLU-189  23.4 23.9 35.7 18.8 101.5 100.8 -113.1
 GLU-189   TRP-190  26.4 26.8 -10.5 6.0 66.2 66.2 23.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-305   THR-306  7.7 7.6 4.8 -2.5 15.4 17.4 -21.5
 THR-306   ASN-307  7.6 7.7 3.3 -0.1 55.2 52.8 44.1
 ASN-307   VAL-308  6.0 6.2 -1.0 -3.6 77.6 79.1 0.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-310   TYR-311  6.1 6.3 -6.0 2.4 79.1 80.3 39.4
 TYR-311   ASN-312  2.8 3.0 0.6 8.4 94.1 94.3 -50.7
 ASN-312   ALA-313  3.8 4.2 4.5 -8.0 68.0 67.2 4.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-352   VAL-353  4.4 4.5 -6.2 6.7 164.8 163.9 35.1
 VAL-353   ASP-354  3.6 3.7 9.0 -7.3 73.3 70.9 12.5
 ASP-354   GLN-355  1.7 1.9 -0.2 -0.8 139.0 142.1 -1.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-378   PHE-379  7.1 6.7 4.5 -5.0 10.5 10.0 35.2
 PHE-379   GLY-380  7.7 7.4 6.2 -11.8 82.3 81.9 -32.9
 GLY-380   MET-381  6.0 5.8 8.3 5.3 33.9 32.4 155.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-395   VAL-396  3.3 3.4 -12.1 6.1 74.3 78.6 -11.6
 VAL-396   TRP-397  2.0 1.9 4.3 -1.0 35.5 35.4 8.4
 TRP-397   VAL-398  4.7 4.6 -3.8 1.5 71.3 69.3 21.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees