Myristoyl-Coa:protein N-Myristoyltransferase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-94   VAL-95  6.7 7.0 13.2 2.1 139.1 132.5 -94.5
 VAL-95   PHE-96  6.7 6.8 1.1 -28.2 147.4 153.5 248.6
 PHE-96   VAL-97  5.8 6.4 18.7 1.7 91.9 89.2 -77.5
 VAL-97   LEU-98  9.2 9.3 7.6 -13.9 84.4 88.0 20.5
 VAL-97   LEU-98  9.2 9.3 7.6 -13.9 84.4 88.0 20.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-97   LEU-98  9.2 9.3 7.6 -13.9 84.4 88.0 20.5
 VAL-97   LEU-98  9.2 9.3 7.6 -13.9 84.4 88.0 20.5
 LEU-98   LEU-99  11.0 11.4 3.8 8.4 22.6 22.0 114.2
 LEU-99   ASN-100  10.6 10.8 1.8 -12.7 50.2 47.4 -59.2
 ASN-100   GLU-101  10.4 10.9 -17.0 42.2 88.9 92.5 -18.6
 ASN-100   GLU-101  10.4 10.9 -17.0 42.2 88.9 92.5 -18.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-100   GLU-101  10.4 10.9 -17.0 42.2 88.9 92.5 -18.6
 ASN-100   GLU-101  10.4 10.9 -17.0 42.2 88.9 92.5 -18.6
 GLU-101   ASN-102  14.1 14.4 -21.6 25.5 88.0 77.2 64.1
 ASN-102   TYR-103  15.5 15.7 -12.1 16.4 59.0 42.2 -17.6
 TYR-103   VAL-104  13.9 14.4 138.2 -35.1 149.4 141.0 -869.8
 VAL-104   GLU-105  15.0 16.7 2.1 30.9 133.3 71.9 38.1
 GLU-105   ASP-106  16.2 20.5 -98.7 -128.3 31.2 64.1 2016.4
 ASP-106   ARG-107  17.3 22.3 -53.5 -9.6 97.2 97.1 -404.1
 ARG-107   ASP-108  21.0 22.3 -10.5 35.7 89.6 36.1 -90.0
 ASP-108   ALA-109  22.1 23.7 -6.2 -108.4 133.0 46.6 -143.4
 ALA-109   GLY-110  20.4 20.4 -114.6 -128.9 72.0 71.0 -391.5
 GLY-110   PHE-111  19.0 19.5 18.4 -11.2 86.5 90.5 -56.0
 PHE-111   ARG-112  15.3 15.8 15.7 -11.7 41.0 38.0 44.0
 ARG-112   PHE-113  13.4 13.5 8.3 -6.3 89.3 96.8 -62.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-118   PHE-119  2.9 3.5 15.1 -10.2 73.1 68.4 37.6
 PHE-119   PHE-120  2.3 2.0 -4.4 -13.1 42.0 49.0 93.6
 PHE-120   ASN-121  3.6 3.7 14.4 -2.6 109.1 112.4 -129.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PHE-329   TYR-330  6.8 6.5 -2.4 5.6 143.8 147.7 15.7
 TYR-330   SER-331  4.5 4.5 -13.6 7.3 82.6 86.6 21.4
 SER-331   LEU-332  1.0 0.8 6.3 3.6 41.2 37.3 98.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-346   ILE-347  6.3 6.1 6.3 -0.7 59.9 68.2 38.0
 ILE-347   GLY-348  4.5 4.5 -21.3 15.3 81.8 84.6 23.9
 GLY-348   TYR-349  2.3 2.3 21.8 -25.5 79.0 82.2 15.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees