Malate/l-Lactate Dehydrogenase Family Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 THR-175   SER-176  5.8 5.4 8.8 -3.2 81.3 78.8 2.1
 SER-176   GLU-177  2.2 1.7 -8.0 -15.3 31.1 31.6 88.1
 GLU-177   SER-178  1.1 1.0 2.7 5.2 98.1 95.7 -5.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-213   ALA-214  8.6 8.7 16.8 -21.2 79.5 80.7 -8.4
 ALA-214   LEU-215  5.2 5.3 8.7 11.7 7.4 8.7 87.1
 LEU-215   ARG-216  3.6 3.7 -5.1 2.5 101.0 101.5 -6.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees