3-Hydroxyisobutyrate Dehydrogenase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-115   ALA-116  14.4 14.6 -10.9 7.7 95.4 95.8 31.1
 ALA-116   ASN-117  17.9 17.9 -8.8 6.7 37.2 38.0 66.6
 ASN-117   GLY-118  19.4 19.6 12.4 -7.4 140.4 138.9 -100.9
 GLY-118   ILE-119  16.2 16.5 9.4 -11.7 134.6 138.5 84.3
 ILE-119   LEU-120  15.8 15.9 -3.5 -2.0 105.6 101.6 -131.5
 LEU-120   LYS-121  15.5 15.5 7.9 -2.1 69.3 63.9 15.5
 LYS-121   LYS-122  19.0 18.9 -1.5 -2.3 45.5 45.6 233.9
 LYS-122   VAL-123  20.7 20.7 9.5 0.0 148.1 152.0 -275.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LYS-141   GLU-142  4.2 4.1 1.9 5.4 51.0 51.2 103.3
 GLU-142   LEU-143  4.9 4.8 -0.6 -2.9 65.1 64.4 29.4
 LEU-143   ALA-144  6.1 6.3 -1.2 3.6 50.7 50.7 8.3
 ALA-144   LYS-145  7.2 7.1 -2.1 -0.2 115.5 115.4 -95.7
 LYS-145   GLU-146  9.7 9.5 -4.7 0.3 106.2 102.4 25.0
 GLU-146   VAL-147  10.9 10.8 8.9 -10.9 139.4 142.8 83.8
 VAL-147   GLU-148  11.7 11.6 -6.2 6.8 71.5 69.6 -48.4
 GLU-148   LYS-149  13.3 12.9 5.8 -7.8 58.7 55.8 4.5
 LYS-149   MET-150  15.6 15.2 -1.4 -0.2 69.2 73.3 1.0
 MET-150   GLY-151  17.0 16.7 -2.0 3.6 20.0 18.4 -30.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ALA-184   ALA-185  8.8 8.7 -1.5 -6.2 112.8 107.8 71.5
 ALA-185   GLN-186  6.5 6.2 7.2 -0.9 132.5 132.5 14.9
 GLN-186   GLU-187  4.3 4.1 -10.3 8.6 52.3 54.0 32.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-189   GLY-190  7.2 7.1 7.6 -2.5 35.8 37.7 109.7
 GLY-190   CYS-191  6.8 6.9 -1.0 6.2 109.3 107.9 12.3
 CYS-191   MET-192  10.6 10.7 -12.0 16.5 60.7 62.2 24.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-193   SER-194  9.4 9.3 -0.2 -3.2 29.5 33.6 43.9
 SER-194   ASN-195  8.8 8.4 2.5 -2.1 82.3 81.0 113.4
 ASN-195   VAL-196  6.7 6.5 -6.4 2.2 140.4 142.5 -119.3
 VAL-196   VAL-197  3.5 3.3 -0.9 3.5 94.6 94.1 16.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 TYR-198   CYS-199  4.3 4.6 5.5 0.7 121.6 123.8 -6.7
 CYS-199   GLY-200  6.4 6.6 -3.3 -2.3 58.6 58.9 52.5
 GLY-200   ALA-201  7.7 7.9 -2.2 -1.9 53.8 54.7 -12.5
 ALA-201   VAL-202  7.5 7.5 -0.8 -1.5 62.5 66.0 17.3
 VAL-202   GLY-203  4.6 4.6 -7.6 10.2 56.0 51.3 13.3
 GLY-203   THR-204  3.4 3.5 -6.9 6.6 123.1 122.6 -5.9
 THR-204   GLY-205  5.9 5.9 -2.0 6.3 121.9 119.4 32.9
 GLY-205   GLN-206  4.2 4.2 -1.3 -5.6 51.1 52.1 -65.0

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees