Regulator Of Nonsense Transcripts 1

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-490   GLN-491  7.3 7.1 -1.2 20.7 105.9 104.1 -10.8
 GLN-491   GLY-492  4.9 4.4 -29.1 62.4 167.5 149.8 207.8
 GLY-492   PRO-493  3.2 2.6 -50.1 9.9 104.7 110.5 -82.3
 PRO-493   PRO-494  1.6 0.8 -8.9 9.6 79.7 68.5 -3.3
 PRO-493   PRO-494  1.6 0.8 -8.9 9.6 79.7 68.5 -3.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-493   PRO-494  1.6 0.8 -8.9 9.6 79.7 68.5 -3.3
 PRO-493   PRO-494  1.6 0.8 -8.9 9.6 79.7 68.5 -3.3
 PRO-494   GLY-495  2.8 3.2 -19.2 -2.4 41.8 47.6 89.5
 GLY-495   THR-496  4.3 4.8 10.9 -2.6 98.0 98.7 -2.3

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-659   VAL-660  6.4 6.3 4.7 -5.8 20.1 14.5 -6.2
 VAL-660   GLY-661  4.9 5.2 -0.2 -18.7 89.1 90.8 -1.5
 GLY-661   ASP-662  1.2 1.7 35.9 -13.6 40.8 50.3 129.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLN-665   LEU-666  6.7 6.8 -6.6 -5.3 156.2 155.0 -58.7
 LEU-666   GLY-667  8.5 8.8 13.4 11.2 33.1 35.4 106.4
 GLY-667   PRO-668  8.0 7.8 4.9 -4.1 38.6 58.9 32.5
 PRO-668   VAL-669  8.6 8.4 0.4 24.3 84.2 76.7 21.6
 VAL-669   VAL-670  12.2 12.0 23.1 -19.8 12.8 9.6 31.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-697   LEU-698  8.8 7.8 -8.7 34.0 145.4 139.1 116.1
 LEU-698   GLN-699  7.0 6.6 -12.5 12.5 122.3 134.5 20.7
 GLN-699   VAL-700  5.8 6.0 17.5 -5.0 36.9 35.2 61.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees