Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-31   THR-32  6.7 5.7 3.2 16.8 88.9 92.6 26.1
 THR-32   PRO-33  7.7 6.7 1.3 -5.7 159.8 144.4 -7.4
 PRO-33   SER-34  6.1 4.8 3.2 -9.6 106.4 102.6 47.9
 SER-34   GLN-35  8.5 7.5 3.0 3.5 93.8 88.6 25.7

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-91   LYS-92  5.5 6.4 -15.7 4.5 102.1 100.6 -59.3
 LYS-92   ARG-93  3.7 4.3 -12.6 6.4 62.6 68.3 6.8
 ARG-93   ILE-94  0.9 1.5 -3.7 -0.5 120.1 120.2 13.8
 ILE-94   LEU-95  2.7 3.4 4.2 -5.6 34.9 28.1 -29.4
 LEU-95   GLN-96  0.9 1.8 -5.8 2.4 86.0 90.9 78.9
 GLN-96   ALA-97  3.1 2.1 8.9 2.4 102.7 105.1 -43.4
 ALA-97   VAL-98  5.1 4.5 10.3 -9.5 47.6 48.0 -34.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-104   LYS-105  1.7 2.0 2.9 2.6 48.7 49.5 -11.2
 LYS-105   LEU-106  2.6 1.8 -13.4 15.5 112.2 114.6 28.3
 LEU-106   GLU-107  3.6 3.2 16.3 -19.8 87.3 87.1 13.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-121   TYR-122  4.0 4.2 2.6 7.8 50.2 57.2 19.6
 TYR-122   VAL-123  4.7 5.3 -7.9 22.9 133.3 127.3 50.5
 VAL-123   ALA-124  2.8 3.2 -31.8 22.8 127.4 140.2 9.1
 ALA-124   GLY-125  4.7 4.8 1.4 -33.2 74.8 57.4 -26.5
 GLY-125   GLY-126  5.4 5.6 67.6 -30.4 95.6 101.9 -37.5
 GLY-126   GLU-127  8.8 9.0 10.7 -6.8 123.2 130.3 7.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ILE-315   PRO-316  5.9 6.1 1.9 -10.6 103.6 100.0 12.3
 PRO-316   LYS-317  5.7 5.0 6.1 -53.0 113.3 117.2 109.3
 LYS-317   PHE-318  4.7 3.6 5.5 -69.3 50.4 66.1 -170.6
 ASP-329   TYR-330  23.9 18.8 94.3 -28.7 29.1 38.7 297.9
 TYR-330   GLU-331  22.8 20.6 38.3 2.0 44.8 82.8 18.0
 GLU-331   GLU-332  24.3 23.6 -68.8 70.9 144.0 129.1 0.6
 GLU-332   GLU-333  24.6 23.0 -46.4 60.7 146.8 137.7 83.3
 GLU-333   GLU-334  24.2 24.2 -14.0 15.7 138.0 105.2 -30.2
 GLU-334   ILE-335  25.2 25.1 -29.4 43.4 127.8 156.2 34.8
 ILE-335   ARG-336  23.2 23.1 31.0 -13.3 28.8 54.1 41.9
 ARG-336   VAL-337  24.9 25.4 44.2 -4.6 40.9 41.1 107.3
 ILE-339   ASN-340  27.8 28.0 33.8 -2.3 31.5 24.2 137.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees