Adp-Dependent Glucokinase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASN-40   ILE-41  5.0 5.1 6.0 2.2 14.9 16.9 148.7
 ILE-41   ASP-42  5.4 5.6 8.1 -7.0 89.1 88.1 79.9
 ASP-42   ALA-43  8.9 9.0 -10.8 6.0 159.2 157.1 -54.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLU-115   LEU-116  10.3 9.9 14.9 0.9 33.1 22.8 375.6
 LEU-116   ARG-117  7.9 8.0 10.7 -3.6 73.1 73.2 65.2
 ARG-117   ILE-118  9.2 9.4 -0.6 -0.3 159.0 158.4 -37.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-142   GLN-143  4.0 4.1 -8.2 12.7 124.0 127.1 144.2
 GLN-143   ASN-144  3.6 3.7 7.1 -1.5 26.7 31.4 -54.2
 ASN-144   PRO-145  5.5 5.6 8.1 -10.2 41.7 35.2 48.3
 PRO-145   LYS-146  5.3 5.1 3.2 -5.8 142.1 138.4 145.6
 PRO-145   LYS-146  5.3 5.1 3.2 -5.8 142.1 138.4 145.6

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-145   LYS-146  5.3 5.1 3.2 -5.8 142.1 138.4 145.6
 PRO-145   LYS-146  5.3 5.1 3.2 -5.8 142.1 138.4 145.6
 LYS-146   LEU-147  5.6 5.7 9.4 -0.4 99.6 103.8 16.5
 LEU-147   GLN-148  1.9 2.2 -6.7 2.0 126.4 126.0 -39.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-174   ALA-175  14.4 14.6 -1.4 6.3 35.4 32.2 -6.4
 ALA-175   ILE-176  12.8 12.8 -1.6 -14.6 93.0 95.5 20.3
 ILE-176   ALA-177  10.0 10.2 14.1 -25.6 126.3 116.0 196.1
 ALA-177   GLU-178  9.9 10.3 7.3 -3.7 79.0 79.9 2.9
 GLU-178   GLU-179  10.1 9.9 -4.6 20.1 42.6 41.1 -245.8

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-212   TYR-213  6.1 6.2 -3.9 6.5 120.5 122.6 95.8
 TYR-213   ASN-214  2.4 2.5 -2.5 3.6 111.2 114.1 -28.5
 ASN-214   ALA-215  4.2 4.2 7.2 -4.7 47.9 48.6 32.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees