Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-61
GLY-62
7.3
7.4
3.1
-5.6
10.6
6.2
-42.7
GLY-62
ALA-63
7.3
7.8
17.1
-1.3
70.6
71.9
27.3
ALA-63
GLN-64
9.1
9.5
-7.1
18.9
150.7
154.4
96.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLU-69
TRP-70
11.8
11.4
8.5
3.5
21.9
15.3
122.2
TRP-70
ASN-71
9.8
9.5
-0.8
1.8
126.2
119.8
8.1
ASN-71
GLY-72
11.2
11.2
0.4
1.1
49.0
45.2
26.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
PRO-88
LEU-89
1.5
1.6
10.2
-7.7
33.5
35.7
50.1
LEU-89
THR-90
1.0
0.9
2.0
-2.6
71.9
72.1
28.0
THR-90
ILE-91
2.7
2.8
-0.9
-4.1
161.8
163.5
-55.6
ILE-91
THR-92
4.3
4.4
-0.1
3.5
111.4
111.2
-15.0
THR-92
TYR-93
5.9
5.9
-9.0
-0.2
173.7
170.2
-90.4
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LYS-103
PRO-104
10.7
11.0
-1.1
-3.4
26.3
30.0
64.8
PRO-104
PHE-105
9.1
9.2
5.6
-10.8
138.3
142.1
22.5
PHE-105
MET-106
9.6
9.5
5.0
-11.4
142.0
141.9
44.9
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-215
TYR-216
7.2
7.4
-3.7
-2.2
80.0
79.3
24.0
TYR-216
GLY-217
4.3
4.4
6.9
-6.3
118.3
116.9
28.5
GLY-217
VAL-218
5.8
5.8
2.5
-0.2
99.8
98.3
-13.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees