D-Glyceraldehyde-3-Phosphate Dehydrogenase 4 (E.C.1.2.1.12)
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-31
ASP-32
13.3
13.1
18.4
4.2
79.3
69.7
113.6
ASP-32
LEU-33
14.0
14.2
65.4
-46.6
133.6
114.0
-196.9
LEU-33
THR-34
17.0
17.2
36.6
-69.4
121.8
145.4
253.9
THR-34
ASP-36
15.2
15.9
56.1
-41.6
149.6
132.2
-105.3
ASP-36
ALA-37
14.2
13.7
14.4
1.0
85.6
82.1
70.5
ALA-37
ASN-38
10.6
9.9
-10.3
7.1
77.8
76.3
-2.4
ASN-38
THR-39
10.9
10.1
5.3
-0.6
39.1
37.8
46.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASP-54
ALA-55
8.9
9.1
-1.4
-1.2
109.5
112.4
-108.0
ALA-55
GLU-56
6.2
6.7
14.4
9.3
33.7
33.3
258.6
GLU-56
VAL-57
4.9
5.0
-13.6
-0.6
84.3
82.8
-85.5
VAL-57
SER-58
2.4
2.5
-11.9
8.3
148.5
148.2
12.6
SER-58
VAL-59
2.8
2.4
-3.2
0.7
84.9
85.0
-43.7
VAL-59
ASN-60
5.4
4.9
6.7
-14.7
35.6
34.7
-76.3
ASN-60
GLY-61
6.5
6.2
27.2
4.7
96.1
98.4
-76.1
GLY-61
ASN-62
10.0
9.9
-37.8
6.8
28.9
40.9
364.3
ASN-62
ASN-63
11.4
11.3
20.5
-10.1
138.9
141.7
-121.9
ASN-63
LEU-64
8.8
8.9
-4.0
5.1
88.4
89.3
-62.7
LEU-64
VAL-65
5.2
5.4
2.4
-6.1
74.1
79.5
33.5
VAL-65
VAL-66
2.9
3.1
-5.3
12.9
56.0
60.3
-93.6
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-68
LYS-69
6.4
6.5
34.0
-27.2
109.3
112.6
9.4
LYS-69
GLU-70
7.2
7.3
9.8
-7.1
88.0
87.0
123.8
GLU-70
ILE-71
7.1
7.3
9.4
-19.6
147.6
147.6
121.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ASN-152
CYS-153
1.6
2.0
7.1
-3.4
70.8
72.7
-16.2
CYS-153
LEU-154
4.5
4.6
5.4
-5.4
6.1
7.2
36.7
LEU-154
ALA-155
4.2
4.4
7.8
-8.2
69.0
65.9
8.5
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
ALA-213
VAL-214
9.0
9.1
4.9
6.9
102.7
102.7
12.1
VAL-214
ALA-215
5.6
5.6
-0.1
-0.8
54.5
59.5
113.9
ALA-215
LEU-216
7.8
7.9
1.4
-11.9
55.4
55.8
-54.3
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
VAL-217
LEU-218
7.0
7.2
26.9
-20.2
31.4
37.4
82.3
LEU-218
PRO-219
5.9
6.0
-10.1
11.6
131.2
138.8
63.7
PRO-219
GLU-220
8.6
8.7
-13.8
16.8
153.9
151.3
-5.1
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-287
VAL-288
7.7
7.4
-14.1
6.1
27.9
25.1
16.4
VAL-288
SER-289
7.7
7.3
-7.1
2.6
69.8
69.8
48.2
SER-289
SER-290
5.0
4.6
15.2
-17.6
128.6
133.0
-21.3
SER-290
THR-291
7.4
7.2
-6.8
5.6
91.6
85.3
16.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
HIS-319
ARG-320
3.0
2.6
3.3
-8.7
131.5
131.5
62.0
ARG-320
VAL-321
3.0
2.8
14.1
-5.9
67.6
68.3
40.8
VAL-321
VAL-322
4.5
4.4
-4.7
3.3
123.8
120.9
-1.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees