Gamma-Glutamyltranspeptidase

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 VAL-273   GLU-274  5.5 5.2 0.9 -0.5 117.6 118.0 17.2
 GLU-274   ARG-275  2.5 2.1 -9.4 8.8 113.1 108.0 -15.5
 ARG-275   THR-276  1.6 1.9 -2.3 -7.6 65.5 66.6 89.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 PRO-291   PRO-292  7.7 7.7 -0.6 10.0 81.3 82.3 -34.6
 PRO-292   PRO-293  9.9 9.8 -7.7 -17.7 72.9 73.9 -149.4
 PRO-293   SER-294  10.6 10.5 8.7 31.4 17.7 9.9 526.7
 SER-294   SER-295  10.3 10.1 -23.2 10.8 86.4 86.3 -27.5
 SER-295   GLY-296  12.9 13.5 14.1 -44.5 46.5 41.6 -402.6
 GLY-296   GLY-297  11.0 12.1 3.1 8.8 103.0 102.4 -148.9
 GLY-297   ILE-298  10.3 10.3 -2.8 5.3 72.7 67.0 -12.2
 ILE-298   HIS-299  13.6 13.3 9.0 -8.6 45.4 48.4 97.4
 HIS-299   ILE-300  15.7 15.7 5.7 3.3 41.7 35.5 48.9

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees