Galactose/glucose-Binding Protein

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ASP-14   ASN-15  6.9 7.1 -2.2 -1.2 85.6 89.7 37.9
 ASN-15   PHE-16  3.4 3.6 -10.7 4.9 129.7 130.3 9.8
 PHE-16   MET-17  2.0 2.1 2.6 0.3 92.0 89.5 40.8
 MET-17   SER-18  5.4 5.5 -0.4 7.7 35.1 35.7 -88.1
 SER-18   VAL-19  4.8 4.7 -12.2 11.6 102.0 105.8 39.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 GLY-109   THR-110  6.9 6.7 4.0 3.3 65.9 65.7 45.9
 THR-110   ASP-111  3.5 3.4 1.2 9.2 42.2 32.7 115.7
 ASP-111   SER-112  2.5 2.3 -0.5 -4.8 62.9 65.7 -63.9
 SER-112   LYS-113  4.7 4.7 -1.7 -9.0 112.9 108.0 -46.0
 LYS-113   GLU-114  5.7 5.9 13.8 2.1 101.1 100.5 38.2
 GLU-114   SER-115  4.2 4.3 0.0 -4.0 34.7 38.5 32.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-255   ASN-256  6.3 6.1 -0.9 4.6 63.3 65.0 33.9
 ASN-256   ASP-257  2.7 2.5 5.5 -5.8 64.5 68.3 -6.7
 ASP-257   ALA-258  5.2 5.1 -4.0 1.2 115.6 117.6 9.1

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 ARG-292   VAL-293  6.3 6.4 8.5 -12.0 106.3 103.8 -25.2
 VAL-293   PRO-294  5.9 5.7 -5.1 10.5 94.2 93.4 -15.7
 PRO-294   TYR-295  4.9 4.7 -0.5 -5.2 36.0 35.1 51.4

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees