Glutamate Receptor 2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 SER-518   LEU-519  6.7 7.1 -5.4 -13.8 57.1 57.0 62.7
 LEU-519   GLY-520  3.4 3.6 14.7 1.3 48.7 52.3 36.1
 GLY-520   ILE-521  1.2 1.5 -6.7 -1.9 57.2 52.3 37.2

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees


Residue
i
Residue
i+1
Distance of hinge axis to residue i in conformer 1
(A)
Distance of hinge axis to residue i in conformer 2
(A)
Change in psi (i)
(deg)
Change in phi (i+1)
(deg)
Angle of psi(i) axis to hinge axis conformer 1
(deg)
Angle of psi(i) axis to hinge axis conformer 2
(deg)
Percentage Progress
 LEU-748   ASP-749  5.6 5.7 8.2 -16.2 140.3 140.4 40.5
 ASP-749   SER-750  2.4 2.4 -0.9 1.0 110.8 110.6 18.7
 SER-750   LYS-751  1.4 1.4 11.4 -26.9 101.6 107.1 12.6
 LYS-751   GLY-752  4.7 4.9 9.5 -0.3 56.2 47.0 16.5

Downloading Image

Graph shows rotational transition at bending residues and can be used to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees