Trna Pseudouridine Synthase B
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
TYR-110
ASP-111
12.2
13.1
157.0
-141.7
36.2
47.8
11.3
ASP-111
GLN-112
9.9
11.5
17.5
-8.4
80.6
83.0
1.2
GLN-112
VAL-113
6.8
7.8
-52.9
39.6
136.4
141.2
-8.5
VAL-113
PRO-114
4.0
5.6
-39.5
3.7
65.6
68.0
9.3
PRO-114
PRO-115
1.2
2.0
12.7
-12.3
90.6
66.5
1.5
PRO-115
ALA-116
4.7
2.1
67.9
44.0
39.4
39.1
60.6
ALA-116
TYR-117
6.4
3.5
118.8
106.9
84.8
109.6
-21.6
TYR-117
SER-118
9.6
6.1
149.1
-79.1
17.5
129.5
2.2
SER-118
ALA-119
10.1
5.6
-107.4
-156.8
121.2
114.3
-105.3
ALA-119
LYS-120
6.7
8.5
-1.2
-122.3
169.2
127.3
153.6
LYS-120
LYS-121
8.4
7.6
3.2
-167.1
55.9
30.0
-118.5
LYS-121
TYR-122
8.1
9.5
70.5
152.1
115.3
40.0
-27.2
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
LEU-139
PRO-140
2.8
4.1
27.3
39.0
100.3
73.0
-5.1
PRO-140
PRO-141
4.7
7.7
-38.9
19.4
155.1
175.0
-11.7
PRO-141
LYS-142
6.9
8.7
29.4
-11.2
65.9
62.3
2.0
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees