Ubiquitin-Protein Ligase E3 Mdm2

(All numbering and residues are taken from first PDB file)

Bending Residue Dihedral Analysis

Residue i Residue i+1 Distance of hinge axis to residue i in conformer 1 (A) Distance of hinge axis to residue i in conformer 2 (A) Change in psi (i) (deg) Change in phi (i+1) (deg) Angle of psi(i) axis to hinge axis conformer 1 (deg) Angle of psi(i) axis to hinge axis conformer 2 (deg) Percentage Progress  TYR-56   LEU-57  7.3 7.6 -0.6 4.4 64.1 71.2 -31.1  LEU-57   GLY-58  4.1 4.2 0.6 -18.3 154.8 152.2 165.8  GLY-58   GLN-59  6.5 6.2 17.7 -4.7 133.0 135.5 -114.9  GLN-59   TYR-60  6.8 6.9 7.5 -6.8 103.2 108.4 -27.4  TYR-60   ILE-61  3.8 4.0 0.0 0.6 46.2 45.9 -1.0 Graph shows rotational transition at bending residues and can be used to identify hinge bending residues. Probably only informative for interdomain rotations greater than 20 degrees