Glutamate Receptor, Ionotropic Kainate 1
(All numbering and residues are taken from first PDB file)
Bending Residue Dihedral Analysis
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
THR-107
LEU-108
7.2
6.4
19.6
-10.7
112.0
117.4
-15.1
LEU-108
GLY-109
3.9
2.9
-7.2
20.5
136.2
135.5
22.8
GLY-109
ILE-110
2.4
2.0
-54.0
35.3
60.3
67.7
22.8
ILE-110
SER-111
4.8
4.4
-3.1
-11.3
60.4
65.8
28.8
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees
Residue
iResidue
i+1Distance of hinge axis to residue i in
(A) Distance of hinge axis to residue i in
(A) Change in
(deg) Change in
(deg) Angle of psi(i) axis to hinge axis
(deg) Angle of psi(i) axis to hinge axis
(deg) Percentage Progress
GLY-209
LEU-210
11.2
10.5
7.4
11.2
103.1
111.0
-24.3
LEU-210
ILE-211
7.7
7.2
5.3
11.2
155.2
152.9
-40.5
ILE-211
ASP-212
7.1
7.4
-174.7
145.3
70.0
43.3
6.6
ASP-212
SER-213
4.2
4.3
140.9
-98.2
72.8
61.2
73.2
SER-213
LYS-214
4.2
3.1
-4.3
10.1
78.8
74.9
13.7
LYS-214
GLY-215
3.5
3.0
6.7
9.5
40.6
43.6
35.7
Graph shows rotational transition at bending residues and can be used
to identify hinge bending residues.
Probably only informative for interdomain rotations greater than 20 degrees